Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6219 ATGGGGTGTTGTGTCTCAACAAGCAATAGAAGCAATGGCGACGCGGGGCCTTCGTCTTGTTTAGAATTGGGACTGTGTTGTCAGAAGAAAGAAAGGAAAGCATTGTCTGATCATGTTGTTTCTCTGCATAAGTTGTCATCCTTACCGAACAGAATAATCGCTAACGGAAAGAGTCGGTCTTCTTGTATATTTACGCAGCAGGGGCGTAAGGGTATTAATCAGGATGCCATGATTGTATGGGAAGATTTTGGGTCAGAAGATGTGATCTTCTGTGGTGTATTTGACGGCCACGGTCCACACGGTCACCTTGTCGCGCGCAGAGTTAGAGATTCCTTGCCGGTAAAACTGCTTTCGTTTTTGCATTCTTCTGAATTTGGTAAAGCTTGTTTCAAGAGGGATGTAAAGGCTGAAAGTGGAGAGGCTGAGAATGATTTCTCTGCTGAGGATGAGGTGAACTCTATGTGGAGAGAAGCTTTCATGAAGGCATATAAAGCTATGGACAAAGAGCTGAAGTCTCATGCAAATTTGGACTGTTTTTGTAGTGGAAGCACATCAGTGAGTGTAGTGAAACAAGGACCAAATTTGTTCATGGGAAATATTGGTGATTCGAGAGCGATCATGGGATCCAAGGATAGCAATGACTTGATGGTGGCGATTCAGCTGACAGTTGATTTAAAACCTGATTTGCCAAAAGAAGAGGAAAGAATTAAAAGTTGCAAGGGTAGAGTATTTGCATTGCAAGATGAACCAGAAGTTCCTAGGGTATGGTTACCTTTTGATAATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGCGTGATTTCTGTACCTGAATTTACGCACCGGATTCTCACTGATAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGGTATGGGATGTTTTGAGCAATGAAGAGGTGGTGGATATAGTATCATCAGCACCGAGTCGAACGTCAGCAGCAAGGGTTCTGGTGGAATCCGCGGCACGAGAGTGGAAACTCAAATATCCGACTTCGAAAATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGATGGAAAAATGGACTTAGAAGAATCAGATGGTGATGAACAATGCTATTCTTCTGCAACAATCCAGAGCAACAACCATTCGGGTAATCCAGTTGAGTCGGACGACGGTAAAAAATCCGAGCCTTCTTTGCGAAGAAACTTCACTGTGAGAACATCAGAAGAAAACGAAACATTTGGAGTAGGAGGAGGAGAATCTGTTAATGTTGAAGATGGAACATCATCAGCAGCAGAAGATCAAAACTGGTCAGGTCTAGAAGGTGTCACCCGAGTAAACTCACTCGTACAACTTCCTAGATTTTCTGAAGAAAAGCCTAACTCTTGA 1398 0.4342 MGCCVSTSNRSNGDAGPSSCLELGLCCQKKERKALSDHVVSLHKLSSLPNRIIANGKSRSSCIFTQQGRKGINQDAMIVWEDFGSEDVIFCGVFDGHGPHGHLVARRVRDSLPVKLLSFLHSSEFGKACFKRDVKAESGEAENDFSAEDEVNSMWREAFMKAYKAMDKELKSHANLDCFCSGSTSVSVVKQGPNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPKEEERIKSCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKEYGVISVPEFTHRILTDKDQFIVLASDGVWDVLSNEEVVDIVSSAPSRTSAARVLVESAAREWKLKYPTSKMDDCAVVCLFLDGKMDLEESDGDEQCYSSATIQSNNHSGNPVESDDGKKSEPSLRRNFTVRTSEENETFGVGGGESVNVEDGTSSAAEDQNWSGLEGVTRVNSLVQLPRFSEEKPNS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6219 465 MobiDBLite consensus disorder prediction 426 442 - -
Psa5g6219 465 SMART PP2C_4 49 357 IPR001932 -
Psa5g6219 465 Pfam Protein phosphatase 2C 86 336 IPR001932 -
Psa5g6219 465 CDD PP2Cc 59 359 IPR001932 -
Psa5g6219 465 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 453 - -
Psa5g6219 465 SUPERFAMILY PP2C-like 55 361 IPR036457 -
Psa5g6219 465 MobiDBLite consensus disorder prediction 379 442 - -
Psa5g6219 465 Gene3D - 50 361 IPR036457 -
Psa5g6219 465 MobiDBLite consensus disorder prediction 390 410 - -
Psa5g6219 465 ProSiteProfiles PPM-type phosphatase domain profile. 60 359 IPR001932 -
Psa5g6219 465 PANTHER ALPHABET, ISOFORM E-RELATED 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6219 Psa-Chr5 530606157 530609430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6219 1 465 PP2C-type Phosphatase Gene Family AT1G03590 67.728 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6219 - - gmx:100788149 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6219 5 530606157 530609430 Psa5g6219 5 530606157 530609430 ECH