Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6211 ATGAGTGAGATGAGATCTACTTCACAGTACAAGAGAATGAAATTGAAAATCCATTTACATATTCTATTTGGATTGATGTTGATCTGTATAGTTCAGTTTTCATTTGCAGCTACTAATCCCTCTGATGTCGCCGCAATTAATAGATTATATGCTGCAATGGGAAACCCTGTACTTTCTGGGTGGGTTTCTAGTGCGGGAGACCCGTGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATACACTCATACAAGAAATAACTTTGGTTGGTGCAAATTTGGGAGGAGAGCTTGGTGATAGCTTAGGAACGTTTGTTTCCATCAAATCAATAACTCTAAGCAACAACCACATTGGAGGAAGTATTCCGTCAAGTTTGCCAGTCACCTTGCAAAACCTTTTTCTTTCGGGTAACCAGTTCAATGGAAGTATTCCAGTCACTTTATCGACATTGGCAGAACTTACTGACATGTCTCTTAATGATAATCTGCTGACTGGAGAAATACCAGACGCCTTCCAGTCTCTTACGCGATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTGTAGAGAGTTTGTCAGCTCTGACGACTTTAAATTTACAGAATAATAGCCTGTCTGGGACACTCGATGTTTTACAAGACCTTCCACTGACAGAATTGAATGTCGATAACAACCAGTTTTCTGGATCAATACCTCCAAATTTGTTAAGCATCCCTAACTTTAGTAAAGATGGAAACCAATTTAACCTTGATGGTAATGCTACTATAGCACCAGCTCGTCCACCTCATTCTCCAATAACAACTTCACCATCAGGAACTGTGGTTCCCGGGACACCATTTTCTGGACGGGTACCTCCTAAACATGCCAATGGACCAACTACATCAAAGAAATCAAGTTCCGAGAAATCAAAAACAAACACTAAAAGAGTGGTTTGGATTACTATTTCATGTGTATTGGGGTTTATCATCTTGGCACTGGCACTTGTTCTCTTTCTTCCAAGATGTAGCAAACTGGAACGGGTTGACAGAACCTCCAAGCAACATCTTATTGGAGCATATGGAGGCGAAAGAGCAAATCCATGGAATAATGGGGCTCTGGTCCAACCACCTAGTCAAACTGAGAAAGTACTGAAAGGGGCTGTTGTAAGGCCAAAAGAGAATCGTCAAGCAGAGAAAGATGAACAAAGAATGGAAACAATTCCAAAGCTATTAAGTCATGAGATTGATATAGGTGCACTAGATCTAGATTCAATGCCACCTTCACCCCCACCCCCACCTCCTCCTCCACCACTTTCCACTGAGAAGGTGGTTGTTGAGCCAACCACATTCCCTGGAGGGTCTAACACCAATCCTTCCAAAAGAAGTCCAGTTCTTCCCACCTTTGCAAAATCTTTCACCGTTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGGTTAGGCATGTTGGGGAGTGTATATAGGGCAGAGCTTCCTAATGGGAAGATACTTGCTGTGAAGAAACTAGACAAAAGAGTTTCAGATCACCAAGAAGATGATGAGTTTCTTGAATTGGTAAACAATATCGACAGAATTCGACATGCAAATGCAGTTGAGCTTATTGGGTACTGTGTAGAGCATGGACAGAGGCTTCTGATCTATGAATACTGCAGTAATGGGTCGATGTATGAAGCACTTCATTCAGATGATGATTTCAAAACAAGGCTGTCTTGGAATGCTCGTATTCGGATAGCACTTGGAGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCAAACATTCTCCTTGATGAGGATCTATCTGTCCGTGTATCTGACTGTGGTTTGGCTCCGTTAATAACTAAAGGTGCTGTACGTCAGCTCTCAGGACAGCTGCTAGCAGCTTATGGCTATGGGGCTCCAGAATTTGAGTCAGGAATTTACACCTACCAAAGCGACGTGTACAGCTTTGGAGTCGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGGACACGACCTCGAGGTGAGCAGTTTCTTGTAAGATGGGCAATTCCTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATAAAGCTTACCCTGCCAAATCGTTGTCAAATTTCGCAGACATTATTTCTAGATGTGTTCAGTCCGAGCCAGAATTCAGACCAGCAATGTCGGAGGTTGTCTTGTATTTGCTAAATATGATAAGGAGAGAGTCTCAACAAAATGAATCAAATGAATGA 2319 0.4191 MSEMRSTSQYKRMKLKIHLHILFGLMLICIVQFSFAATNPSDVAAINRLYAAMGNPVLSGWVSSAGDPCGEAWQGVQCNDTLIQEITLVGANLGGELGDSLGTFVSIKSITLSNNHIGGSIPSSLPVTLQNLFLSGNQFNGSIPVTLSTLAELTDMSLNDNLLTGEIPDAFQSLTRLINLDLSNNNLSGELPPSVESLSALTTLNLQNNSLSGTLDVLQDLPLTELNVDNNQFSGSIPPNLLSIPNFSKDGNQFNLDGNATIAPARPPHSPITTSPSGTVVPGTPFSGRVPPKHANGPTTSKKSSSEKSKTNTKRVVWITISCVLGFIILALALVLFLPRCSKLERVDRTSKQHLIGAYGGERANPWNNGALVQPPSQTEKVLKGAVVRPKENRQAEKDEQRMETIPKLLSHEIDIGALDLDSMPPSPPPPPPPPPLSTEKVVVEPTTFPGGSNTNPSKRSPVLPTFAKSFTVASLQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQEDDEFLELVNNIDRIRHANAVELIGYCVEHGQRLLIYEYCSNGSMYEALHSDDDFKTRLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGAVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNKAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQNESNE* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6211 772 SUPERFAMILY Protein kinase-like (PK-like) 457 757 IPR011009 -
Psa5g6211 772 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Psa5g6211 772 MobiDBLite consensus disorder prediction 285 309 - -
Psa5g6211 772 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Psa5g6211 772 SUPERFAMILY L domain-like 38 246 - -
Psa5g6211 772 Gene3D Transferase(Phosphotransferase) domain 1 561 772 - -
Psa5g6211 772 Gene3D Phosphorylase Kinase; domain 1 453 560 - -
Psa5g6211 772 PANTHER OS01G0253100 PROTEIN 26 772 IPR045271 GO:0004714|GO:0006468
Psa5g6211 772 Pfam Protein tyrosine and serine/threonine kinase 486 755 IPR001245 GO:0004672|GO:0006468
Psa5g6211 772 Gene3D Ribonuclease Inhibitor 39 269 IPR032675 -
Psa5g6211 772 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6211 772 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 26 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6211 Psa-Chr5 530323575 530330212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6211 28 764 Strubbelig Receptor Gene Family AT4G03390 61.873 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Psa5g6211 PK_Tyr_Ser-Thr 8.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6211 - - mtr:MTR_2g090120 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6211 5 530323575 530330212 Psa5g6211 5 530323575 530330212 ECH