Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6177 ATGGCATATGCTACAAAACTTGAGCATAAGTTTATTGAGCAGACTCTAATTATTCCATCATCAACAACGTCAATTTCTCTCCCTCTCACATTTCTTGATATCCCTTTGGCGGGTCCAATTTATGTTAAACGTCAATTTTTCTATCGCTTTTCGCATTCGCCGGATTATTTTTACAAAACAACACTTCCTTCTCTCAAACACTCTCTTTTGCTTACTCTTCAACATTTCTTCCCTCTCGCGGGAAATCTCTTCTCTCCACCATCACCCGACAAACCGTTTATCGTCTGCACGCAAAAGGACTCTGTCGTATTTACCATTTTCGAAACTTCCGCGGATTTCAACCATCTCTCGGCCAATAAGCATCCCAAAAATATCTCAGACTTTAATCACCTTGTTCCAAAATTAACCCATAAAACAACCCTAGATGATAATGAGATTGAAAGTAACACCTTCATTTTCCCTTTGTTGACTTTACAAGTCTCGGTTTTCCCTAACCAAGGTCTTTGCATCGCAATCACATATTGTCATGTCATGGATGATAATTGCTGTAATCATTTCATGAAAACTTGGTCTTCTATCCATGGAAATTTTGAAGAAGTTGACATGAAGTCAACACCTTGTTTTGATAGGAATATTTTGAAGGACCCAAAAGGGCTTGAGAATGTTTTCTTAAGAGACTATTTTGAAGAAAGAAAAACATGGAAGAATAAAGTTACTACTCAAACTCAAAGTCAAGTTACCCAAGAAAAACACCAAGACTATGTCAAAGCAACTTTTGTTTTTGGAAAAGAAAAAATTGAAAGTATGAAAAGATTCATACTCAATCAATGGAAGAAAAATGATCACGAGATTAAAGCGCCAGAATTTTTATCTAAATTCGTCGTAACTTGTGGATTTATATGGGCTAGTTTGGTTAAAACAAGATATAGAAACGACAACGATGACGATGAAAAAGAAGAATATTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGATACGCGATACCGGAAGGATACTTTGGAAATTGTTTAACGCTATGTCATGCAACGGCGAAGAGAAAGGATCTAAAAGGAGAAGATGGTTTTGTGAATGGTGTTAAGGTAATTGAAAGGGCGGTAACTGAGATGAAAAAGGAACCTTTTAGAGATGCGACGGAATGGAGGGAGACATTTAAGAAAATGTATGAGTTTGGAAGTGTGTTGTTGGTAACAGGATCACCTAAGTTTAATGTTTATGACATTGATTTTGGATTTGGAAAACCTGTTAAAGTTGACATGTTGCATTCGTTTAAATGTATGTCTATTGCTGAAAGTGGAGATGGAGAAGGTGGACTTGAGGTTGGGTTGGTATTTAAGAGTGGGGAGTTTGAATATTTTTGTTCTGTCATTGAACAAGGACTTGAAACTTTTAAATTTTAA 1422 0.3629 MAYATKLEHKFIEQTLIIPSSTTSISLPLTFLDIPLAGPIYVKRQFFYRFSHSPDYFYKTTLPSLKHSLLLTLQHFFPLAGNLFSPPSPDKPFIVCTQKDSVVFTIFETSADFNHLSANKHPKNISDFNHLVPKLTHKTTLDDNEIESNTFIFPLLTLQVSVFPNQGLCIAITYCHVMDDNCCNHFMKTWSSIHGNFEEVDMKSTPCFDRNILKDPKGLENVFLRDYFEERKTWKNKVTTQTQSQVTQEKHQDYVKATFVFGKEKIESMKRFILNQWKKNDHEIKAPEFLSKFVVTCGFIWASLVKTRYRNDNDDDEKEEYFRFAGDCRDRLGYAIPEGYFGNCLTLCHATAKRKDLKGEDGFVNGVKVIERAVTEMKKEPFRDATEWRETFKKMYEFGSVLLVTGSPKFNVYDIDFGFGKPVKVDMLHSFKCMSIAESGDGEGGLEVGLVFKSGEFEYFCSVIEQGLETFKF* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6177 473 Gene3D - 251 471 IPR023213 -
Psa5g6177 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 473 - -
Psa5g6177 473 Pfam Transferase family 11 461 - -
Psa5g6177 473 PANTHER - 6 473 - -
Psa5g6177 473 Gene3D - 9 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6177 Psa-Chr5 528464564 528465985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6177 52 460 Monolignol Biosynthesis Gene Families AT5G48930 21.963 1.43e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6177 - - gmx:100813271 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6177 5 528464564 528465985 Psa5g6177 5 528464564 528465985 ECH