Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6150 ATGGCCATGTTCAAAACAACAAAACCATTGTTTTGGTTTTCTCTTCTCAACCTCTTCTTCTCTATACACTTCCATCCTTCTCTTGCAGCTTTAACAACCATCTCTGCAAACCAATCTCTCTCTGCTTACCAAACTCTAGTCTCTAAAGGAGGAAGATTTGAATTGGGTTTCTTTAAACCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTTAGCCAACAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCTGATAAAAACACTGCAACCTTAAAAATCTCAGCTGGTAATTTAGTTCTATTAGACGAGTCTTCAAAACAAGTTTGGTCCACAAACATGAGTTTTCCTAAGTCAGTTTCTGTTTCAGCTATTCTCTTAGATAGTGGAAATCTTGTTTTGAGAAATAGGCCTAATGATGATGCATCAGATCCTCTATGGCAGAGTTTTGATCATCCAGCAGATACATGGCTTCCCGGTGGCAAAATTCGTCTAGACAAGAAAACAAAGAAGCCTCAGTATCTCACTTCATGGAAGAATAAGGAAGATCCCGCAACGGGTCTTTTCTCTTTGGAACTAGACCCGAAAGGAACAAGTGCGTATTTAATTCTTTGGAATAAGTCTGAAGAGTATTGGACAAGTGGACCTTGGAATGGAAGTATTTTTAGTCTTGTTCCTGAGATGACGTTAAATTACATTTACAATTTATCATTTGTGTCGAATGAGAATGAGAGCTATTTAACTTACTCCGTGTATAACCCTTCCATTATATCGCGGTTTGTGATGGATATATCCGGGCAGATCAAGCAACTATCATGGTTGGAAAGTATAGAAGAGTGGAATCTGTTTTGGGCGCAGCCGAGAGCACAGTGTGAGGCTTATTCTTTCTGCGGTGCATTTGGGATCTGCAATGAAAACTCACTGCCTCATTGTAGTTGTTTGAGAGGTTTTGAGCCCAAGTCAGTGTCTGATTGGAATATGGAGGATCACTCAAGTGGGTGTATCAGAAGAACAAGTTTTCAATGTGAGGGTTCCGATCCCTCTAATAAGGATAATTCCGCGTTCCTTGCAATGACCAACATGGCATTACCTACTCATGCACAATCTGTGGGGTTAGGGAATGCCGATGAATGTAAATTAACTTGTTCGAAAAACTGCTCCTGCACTGCTTTTACATATGATAGGAATGGATGTTCAGTTTGGTTGGGAGACCTCATAAATCTACAACAATTGTCTTCTGATGATAGTAGTGGACAAACTTTGTATGTCAAACTTGCACCAGAAGAAACTGTTTATGCTAGTGAAAACAGATATCGAGAGAGGGTGATTATTGGTGCTGCTGTGGGTGCGGTTGTTGGCATAGGGATACTCTTATGCCTTCTATTGTTTTTCATTTTTAGGCGAAGAAAGAGAATGCTTGTAAATGCAAAGCTTTTAGATGGTTTTATGGTGGAATTTCAGTACAAGGATTTGCAAAATGTGACAGAGAATTTCTCTGAGAAATTGGGAGGAGAAGGAGGTTTTGGTTCGGTTTTCAAAGGAACATTAACTGATTCAAGTGCTGTAGCAGTGAAGAAGCTAAAGGGTGTTAGCCAAGGAGAGAAAAAGTTCAGAACAAAAGTGAGTATAATAGGGACATTAATACATGTTAATCTTGTTCGCATTCGTGGATTCTGTTCAGAAAGTACAACCAAACGGTTTCTGGTTTATGATTACATGCCAAATCTTTCCTTGGATTTCAAGTTATTTGGGAACAACAATTCTGAGGTGCTGGGATGGAAAATGAGATACCAAATCGCTCTTGGAATTGCAAGAGGACTAATTTACCTCCATGAGAAATGCGAAGAATGTATCATACACGGAGATATAAAGCCGGAAAACATTCTCCTTGACGCTGATTTTAGTCCAAAAGTTTCCGACTTTGGTCTAGCTAAGCTAATTGGACGGGATTTCAGCAGAATCGTTACAACCATGAGCGGAACAAGAGGTTATCTTGCTCCAGAGTGGTTATCTAGGGCTGCTATCACAGCGAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTTGAGGTTGTATCAGGTAGGAGGAACTCCGATCCATCTCTAGATGGTGAAGATATTTTCTTTCCTACCTTGGCTGCAAAAATAGTTAACGAAGGTGGTAGTGTTCTTACCGTTTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTTACTCAAATGATAATAGTTGCTTCTTGGTGTGTCCAAGAAAGTGAAACTCAGAGGCCAACGATGCGTCAGGTACTTCAAATTCTTGAGGGAATTTTGGATGTGAATGTGCCACCAATTCCAAGATTCAATCAAGTGTTTGAAGATAACTAA 2388 0.4003 MAMFKTTKPLFWFSLLNLFFSIHFHPSLAALTTISANQSLSAYQTLVSKGGRFELGFFKPGNSSNYYIGIWYKKVSQQTIVWVANRDNPVSDKNTATLKISAGNLVLLDESSKQVWSTNMSFPKSVSVSAILLDSGNLVLRNRPNDDASDPLWQSFDHPADTWLPGGKIRLDKKTKKPQYLTSWKNKEDPATGLFSLELDPKGTSAYLILWNKSEEYWTSGPWNGSIFSLVPEMTLNYIYNLSFVSNENESYLTYSVYNPSIISRFVMDISGQIKQLSWLESIEEWNLFWAQPRAQCEAYSFCGAFGICNENSLPHCSCLRGFEPKSVSDWNMEDHSSGCIRRTSFQCEGSDPSNKDNSAFLAMTNMALPTHAQSVGLGNADECKLTCSKNCSCTAFTYDRNGCSVWLGDLINLQQLSSDDSSGQTLYVKLAPEETVYASENRYRERVIIGAAVGAVVGIGILLCLLLFFIFRRRKRMLVNAKLLDGFMVEFQYKDLQNVTENFSEKLGGEGGFGSVFKGTLTDSSAVAVKKLKGVSQGEKKFRTKVSIIGTLIHVNLVRIRGFCSESTTKRFLVYDYMPNLSLDFKLFGNNNSEVLGWKMRYQIALGIARGLIYLHEKCEECIIHGDIKPENILLDADFSPKVSDFGLAKLIGRDFSRIVTTMSGTRGYLAPEWLSRAAITAKADVYSYGMMLFEVVSGRRNSDPSLDGEDIFFPTLAAKIVNEGGSVLTVLDPRLEGNADIEEVTQMIIVASWCVQESETQRPTMRQVLQILEGILDVNVPPIPRFNQVFEDN* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6150 795 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Psa5g6150 795 Pfam D-mannose binding lectin 79 185 IPR001480 -
Psa5g6150 795 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Psa5g6150 795 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Psa5g6150 795 Gene3D - 28 156 IPR036426 -
Psa5g6150 795 SMART blect_4 37 159 IPR001480 -
Psa5g6150 795 SUPERFAMILY Protein kinase-like (PK-like) 488 775 IPR011009 -
Psa5g6150 795 SMART ntp_6 356 431 IPR003609 -
Psa5g6150 795 PIRSF SRK 2 795 IPR024171 GO:0004674
Psa5g6150 795 CDD B_lectin 37 159 IPR001480 -
Psa5g6150 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Psa5g6150 795 CDD PAN_AP_plant 347 432 - -
Psa5g6150 795 Pfam PAN-like domain 355 414 IPR003609 -
Psa5g6150 795 CDD STKc_IRAK 510 777 - -
Psa5g6150 795 Gene3D Phosphorylase Kinase; domain 1 470 578 - -
Psa5g6150 795 Pfam Protein kinase domain 510 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6150 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 224 IPR036426 -
Psa5g6150 795 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Psa5g6150 795 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 9 794 - -
Psa5g6150 795 SMART serkin_6 503 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6150 795 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 794 - -
Psa5g6150 795 ProSiteProfiles Protein kinase domain profile. 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6150 Psa-Chr5 526571247 526573634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6150 456 784 Receptor kinase-like Gene Family AT5G20050 40.771 6.63e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g6150 Pkinase 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6150 - - gmx:100782119 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6150 5 526571247 526573634 Psa5g6150 5 526571247 526573634 ECH