Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6146 ATGTTCAATATGATGAAACCATGGTTCTGGTTTTCTCTTCTTAGCCTCTTCTTCTGTTTACACTTCCATCCTTCTCTTGCAGCTTTAACAACCATCTCGACAAACCAATCTCTCTCTGGTGACCAAACTCTTATCTCTAAAGGTGGAATCTTTGAATTGGGTTTCTTCAAACCAGGTAATAGTTCCTCTAAGTACTACATAGGAATATGGTACAAAAAGGTTAGCCAACAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCTGATAAAAACACTGCAACCTTAAAAATCTCAGCTGGTGATTTAGTTCTATTAGACGAGTCTTCAAAACAAGTTTGGTCGACAAACATGAGTTTTCCTAAGTCAGTTTCTGTTTCAGCTATTCTCTTAGATAGTGGAAATCTTGTTTTGAGAAATAGGCCTAATGATGATGCATCAGATCCTCTATGGCAGAGTTTTGATCATCCAGCAGATACATGGCTTCCCGGTGGCAAAATGAAGCTTGACAAGAAAACAAAGAAGCCTCAGTATCTCACTTCATGGAAGAATAAGGAAGATCCTGCAACGGGTCTTTTCTCTTTGGAACTTGACCCGAAAGGAACAAGTGCCTATTTGATTCTTTGGAATAAATCTGAACAGTATTGGACAAGTGGACCTTGGGATGGACATATTTTTAGTCTGGTTCCTGAGATGAGGTTGAATTATATCTACGATTTTTCGTTCGTGTCGAACGAGAATGAGAGCTATTTCACTTACTCCATGTATAACCCTTCCACTATATCGCGGTTTGTGATGGATATATCCGGGCAGATCAAGCAATTATCGTGGTTGGAGAATATCAAACAGTGGAACCTGTTTTGGTCGCAGCCAAGAACACAGTGTGAGGTTTATGCTTTCTGCGGCGCGTTTGGAACCTGTACTGAGAACTCGAAGCCGTATTGTAATTGTTTGGATGGTTTTGAGCCAAAGTCACAGTCTGATTGGGATCTGGAGGATCACTCAGGCGGGTGTATGAGAAAAACAAGGTTGCAATGCGAGAGTTCTGATCGCTCTAATGGGGTAAAGGACGGGTTTCGTCCAATCCCCAACATGGCATTGCCTAAACATGCACAATCTGTGAGATCAGAGAATGCAGAAGAATGTGAATCGATATGCTTGAACAACTGCTCTTGTTCTGCTTATTCGTATGACAGTGATGAATGTTCAGTTTGGATTAAAGACCTACTGAATCTGCAACAATTTTCTTCAGATGATAGTAGTGGAAAAACTTTGTATTTAAAACTTGCAGCATCAGAGTTTAATGCTGGGAAAAACAGTAACAGGTTGATTATCGGTATTGTAGTAGGCGCGGTAGTTGGCATAGGGCTTCTCTTGGCCCTTCTGTTTGTCGTGCTTAGGCGAAGAAACCGAACAGTTGGAACAGGTAAGCCTGTGGAGGGTTCGTTGGTGGCATTTGGCTACAGAGATATGCAAAATGCGACGAAGAATTTCTCAGAGAAATTAGGAGGAGGTGGATTCGGTTCGGTGTTCAAAGGAACGTTAGCTGATTCAACTGTAGTGGCAGTAAAGAAGTTGGAAAGTGTTAGCCAAGGAGAGAAACAGTTCAGAACAGAAGTGAGTACAATAGGAACAGTGCAACATGTTAATCTTGTTCGTCTCCGTGGATTCTGTTCGGAAGGTACTAAACGGATGCTGGTTTATGATTACATGCCAAATGGTTCATTGGATTTTCATTTATTCATGAAGAAGGATACTTATGAGCTTTTGAACTGGAAAATGAGATACCAAATAGCTCTTGGAACTGCTAGGGGGTTAACTTACCTCCACGAAAAGTGCCGAGACTGTATCATACACTGCGACGTAAAGCCAGAAAACATTCTCTTAGACACGGATTTCTGTCCGAAAGTCGCGGACTTCGGCCTAGCTAAGCTAGTTGGTCGAGATTTCAGCAGGGTCTTAACAACCATGAGAGGAACAAGAGGCTATCTCGCGCCAGAGTGGATTTCTGGGGTGGCTATTACAGCGAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTCGAGGTTGTATCAGGTAGGAGAAACTCCGAGCCATCGGAAGAAGGTCAAGTTACTTTCTTTCCTACCTTAGCTGCAAAGGTAGTCATTGAAGGTGGCAGTGTGATCACCCTATTGGATCCTAGATTGGAGGGAAACGGGGACGTTGAAGAAGTTGCCCGAATAATAAAAGTCGCTTCTTGGTGCGTCCAAGACAATGAAAACGAAAGGCCAACAATGGGTCAGGTAGTTCAAATTCTTGAAGGGATTTTGGAAGTGAATTTGCCTCCGATTCCAAGATCCCTTCAAATGTTTGTTGATAATCACGAGAACATGGTTTTCTACACCGATTCTAGCTCGACTCAAAGTTCACAGGTTAAGAGTAACAGCTCAACAGGCTCTCAGGTCAAAAGCAACATATCATCTGCTAGCTCTAATTTTTCTGCAGAAAATTAG 2499 0.4226 MFNMMKPWFWFSLLSLFFCLHFHPSLAALTTISTNQSLSGDQTLISKGGIFELGFFKPGNSSSKYYIGIWYKKVSQQTIVWVANRDNPVSDKNTATLKISAGDLVLLDESSKQVWSTNMSFPKSVSVSAILLDSGNLVLRNRPNDDASDPLWQSFDHPADTWLPGGKMKLDKKTKKPQYLTSWKNKEDPATGLFSLELDPKGTSAYLILWNKSEQYWTSGPWDGHIFSLVPEMRLNYIYDFSFVSNENESYFTYSMYNPSTISRFVMDISGQIKQLSWLENIKQWNLFWSQPRTQCEVYAFCGAFGTCTENSKPYCNCLDGFEPKSQSDWDLEDHSGGCMRKTRLQCESSDRSNGVKDGFRPIPNMALPKHAQSVRSENAEECESICLNNCSCSAYSYDSDECSVWIKDLLNLQQFSSDDSSGKTLYLKLAASEFNAGKNSNRLIIGIVVGAVVGIGLLLALLFVVLRRRNRTVGTGKPVEGSLVAFGYRDMQNATKNFSEKLGGGGFGSVFKGTLADSTVVAVKKLESVSQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKRMLVYDYMPNGSLDFHLFMKKDTYELLNWKMRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDTDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEVVSGRRNSEPSEEGQVTFFPTLAAKVVIEGGSVITLLDPRLEGNGDVEEVARIIKVASWCVQDNENERPTMGQVVQILEGILEVNLPPIPRSLQMFVDNHENMVFYTDSSSTQSSQVKSNSSTGSQVKSNISSASSNFSAEN* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6146 832 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Psa5g6146 832 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Psa5g6146 832 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6146 832 CDD B_lectin 35 158 IPR001480 -
Psa5g6146 832 MobiDBLite consensus disorder prediction 798 832 - -
Psa5g6146 832 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Psa5g6146 832 SMART blect_4 35 158 IPR001480 -
Psa5g6146 832 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 798 - -
Psa5g6146 832 CDD STKc_IRAK 503 771 - -
Psa5g6146 832 CDD PAN_AP_plant 343 431 - -
Psa5g6146 832 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Psa5g6146 832 SUPERFAMILY Protein kinase-like (PK-like) 483 805 IPR011009 -
Psa5g6146 832 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Psa5g6146 832 Gene3D - 26 155 IPR036426 -
Psa5g6146 832 Gene3D Transferase(Phosphotransferase) domain 1 572 776 - -
Psa5g6146 832 Pfam D-mannose binding lectin 78 184 IPR001480 -
Psa5g6146 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 222 IPR036426 -
Psa5g6146 832 Pfam Protein kinase domain 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6146 832 SMART ntp_6 355 430 IPR003609 -
Psa5g6146 832 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 798 - -
Psa5g6146 832 SUPERFAMILY Hairpin loop containing domain-like 356 406 - -
Psa5g6146 832 Pfam PAN-like domain 356 412 IPR003609 -
Psa5g6146 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Psa5g6146 832 ProSiteProfiles Protein kinase domain profile. 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6146 832 PIRSF SRK 1 822 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6146 Psa-Chr5 526269887 526273082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6146 452 778 Receptor kinase-like Gene Family AT5G20050 41.989 4.77e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g6146 Pkinase 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6146 - - gmx:100782119 1220.3