Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g6139 | ATGAAGAAAAACTGCGAACTCTGCAAACTTCCGGCTAGAACTTTCTGTGAGTCCGACCAGGCTAGCTTATGCTGGGACTGCGATTCTAAGATCCACAGTGCAAATTTCCTTGTTGCCAGACACGTGAGGACTCTCCTCTGTCACCGGTGCCAGTCTCCGACGCCGTGGAAAGCCTCCGGTGCTAGGCTTAGTAACGCGCTTTCTCTGTGCGAAACGTGCGGCCGCGGTGGTGGTGGAAGGAAATTGGAAGGTGAGCAGGAGGAAGAGAGTGAAGGTGACAATGAGGAGGACGATGAGGTTGATACTGATTTTGATGAGGAAGAGGAAGAGGAAGAGGAGGTTGACGGTGATGAGGATGGTGATAATCAGGTGGTTCCTTGGTCTTCTACGGCGGAGCCGCCGGCGGCTTCGAGTTCTTCCGGTAGCGAAGAGTCGGTTAGTAAGTGCAACGATAACGATGAGGAGGTTGTTTCGAAGTTAGTTACAACAAACTTAGTTTCTCTGAAACGACGTCGTGAGGAGGATCGTGATTTTCAGGCTTCAGATTCGAAAATTTGTGTAAATCAACGTAGGTACGGTGCTGAGAGGAGGAGATGCGACGGAGAACCGCCGTGGAAGGCGTCGATCCGGCAAGTAAGTGACGGAAAAGCCCCGGAGAATTCTCAGCCGCACGATTGA | 678 | 0.5177 | MKKNCELCKLPARTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGARLSNALSLCETCGRGGGGRKLEGEQEEESEGDNEEDDEVDTDFDEEEEEEEEVDGDEDGDNQVVPWSSTAEPPAASSSSGSEESVSKCNDNDEEVVSKLVTTNLVSLKRRREEDRDFQASDSKICVNQRRYGAERRRCDGEPPWKASIRQVSDGKAPENSQPHD* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g6139 | 225 | MobiDBLite | consensus disorder prediction | 88 | 120 | - | - | |
Psa5g6139 | 225 | Pfam | B-box zinc finger | 3 | 42 | IPR000315 | GO:0008270 | |
Psa5g6139 | 225 | SMART | bboxneu5 | 1 | 46 | IPR000315 | GO:0008270 | |
Psa5g6139 | 225 | MobiDBLite | consensus disorder prediction | 123 | 146 | - | - | |
Psa5g6139 | 225 | PANTHER | - | 3 | 192 | - | - | |
Psa5g6139 | 225 | MobiDBLite | consensus disorder prediction | 80 | 155 | - | - | |
Psa5g6139 | 225 | MobiDBLite | consensus disorder prediction | 192 | 225 | - | - | |
Psa5g6139 | 225 | CDD | Bbox1_BBX-like | 5 | 46 | - | - | |
Psa5g6139 | 225 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 3 | 192 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g6139 | Psa-Chr5 | 526039434 | 526041217 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g6139 | 1 | 134 | C2C2-CO-like Transcription Factor Family | AT4G27310 | 44.785 | 7.87e-34 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Psa5g6139 | zf-B_box | 1.3e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g6139 | - | - | mtr:MTR_2g089310 | 231.876 |