Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6137 ATGAAAACCTTTCTTCTGTTTTCCCTTCTTTTCTGGCTGCTATACTTTAAATTATGTTCAGCTAGAGATACTTTGATCTTTGGCCAGAACATATCTCAAGACAACTCAGAGAACCTTGTTTCAATTGGCAAAAAATTTCAACTCGGTTTTTTCTCCTTACCAATTGAAAGTGATGGAAGCACCACAACTCTTAAAAAATACCTTGGAATATGGTATAACAGTTTGGAACCACAAACAGTAGTATGGGTAGCCAATAGAAACAAGCCTATTGTAGATTCCAATGGAGTTTTTCAAATTTCACAGGATGGAAATCTTGTAGTAGCAGATGCATCACAGAGTTATTGGTCCACAGAATTAAAAGTGTCCTCGTCAAGAAACTGCGTAGTCAAGCTCTTGGATTCTGGAAACCTAGTGCTAATGGATGATGATCATCGTTATTTGTGGCAGAGCTTTCAACATCCAACAGATACATTTCTTCCTGGTATGAAAATGGACATAAATTTAACATTGAGTTCTTGGAAAAACGAGCACGATCCAGAAAGCGGAAGCTTCATCTTTAAGCAGGCTCAAAGAGGGGACTATTCAGATTTTATAATAAACAACCGGTCACAGCTTTACTGGTCATTTGATGGACACAATTCAGATAAGATGCTCCATATCATTCTTTCCTTGCTGGAAGACGCGACATCTTATTCATCGTACAACAGGTTATTTAACAAAACCATCAAACAAGAAACCTTTAATTATAATAAATCAAGGCTGTTGATGAATTCCAGTGGAGAGATACAATTTTGGAAGTGGGATGAAAGCATTCAATTTCAATGGGTTAAGGTGTGGTGCCGGCCGTCTGATAAATGTGACATAAATAACTATTGTGGTAACTTTAGCAGCTGCAACAAAAATAATTGGAAACCATGTAAGTGTCTGCCAGGATTCCGTCCCAGGTTGTCGGGTCATAACTACGTCGGAGAACGCTTTCAAGGGTGTGTTAGAAAATCATCAACGCCGTGTGTCAGTGCCAGTGCCACAACCAACAATAACATGACATTCTTCAACTTAACAAAGATAAAAGCAGGAAAACCAGACATAGGATTCTTATCAGAAACCGAAGGAAGTTGTCAATCTCAATGTCTTAACATGTGTCCGTGCAACGCTTATTCGTATAATTCTTCTTATTATGATCGTAGTTACTCCATATGCTGGATATGGACACGACAATTACCTATGCTTCAAGAGGAGCAAGACGATGGCCAGGATTTTTCGGTCCTAGTCAAGAGATCGGACATAGAATCAACTGCAAAATCATGTGGACCTTGTGGCACATACATAATTCCTTATCCGCTAAGCACCGGGCCGACTTGTGGAGATCCTATGTACAACAAGTTCAATTGTAATTCGTTGACAGGGCAGGTTAGTTTCATGATGCAAGATGGAAAATCATATCGAGTTACCTCGATTGAAGAAGTGGATAGAAAGTTCTACATCAAAACAAATGATTCAGATCGCTGCGATGATTCCAGTTCCAATAGTTATCAAGATGATAAAACTAGCTCACCATTTATTGTGACTAATTGGTGTTCTACGCAAGACGAAATAGAACTCAATTGGACACCAGCACCAGAACCACTTTGTGATAAGTATTTTGGCTGCAAAAACTGGTCTCATTCCACATGCATTGCAAATAGGTGCCACTGCGATTCAAAATATTCGTGGAACGCCTCAAGTTTAAGTTGTATCCAAGAATCATCAAGAAACCATTCAACCAATCGATCGCGAATGATTCTTGGAATAATTTGTATAGCCATCATTATCCTAACATGTATAGGAGTGCTTGCTTATGTGAGAAGAAACAAAATAGCCAACAGGCTTGATAAGGTGAGCGTTCGAATTCAAGAGAGCTTATACGACAGTGAAAAACATGTGAAAGATTTGATCGGCTTAGGAAGCTTAGAAGAAAATGAAGGTGAAAGCATTGAAGTACCTTATTATACCTTTAGAAGCATTCGAGCAGCTACAAATAATTTCTCAGATTCAAACAAGCTTGGACAAGGAGGTTATGGTCCTGTTTATAAGGGAAGATTTCCTGGAGGACAAGATATTGCTATAAAGAGGCTTTCGAGTGTTTCAACTCAAGGCTTGCAAGAATTTAAAAATGAGGTTGTTTTGATTGCTAAACTTCAACATCGAAATCTTGTTAGACTTAGGGGTTATTGCATTAAAGGAGATGAAAAAATCTTGCTATATGAATACATGTCAAACAAGAGCTTGGACTCATTTATATTCGGTTAG 2289 0.3836 MKTFLLFSLLFWLLYFKLCSARDTLIFGQNISQDNSENLVSIGKKFQLGFFSLPIESDGSTTTLKKYLGIWYNSLEPQTVVWVANRNKPIVDSNGVFQISQDGNLVVADASQSYWSTELKVSSSRNCVVKLLDSGNLVLMDDDHRYLWQSFQHPTDTFLPGMKMDINLTLSSWKNEHDPESGSFIFKQAQRGDYSDFIINNRSQLYWSFDGHNSDKMLHIILSLLEDATSYSSYNRLFNKTIKQETFNYNKSRLLMNSSGEIQFWKWDESIQFQWVKVWCRPSDKCDINNYCGNFSSCNKNNWKPCKCLPGFRPRLSGHNYVGERFQGCVRKSSTPCVSASATTNNNMTFFNLTKIKAGKPDIGFLSETEGSCQSQCLNMCPCNAYSYNSSYYDRSYSICWIWTRQLPMLQEEQDDGQDFSVLVKRSDIESTAKSCGPCGTYIIPYPLSTGPTCGDPMYNKFNCNSLTGQVSFMMQDGKSYRVTSIEEVDRKFYIKTNDSDRCDDSSSNSYQDDKTSSPFIVTNWCSTQDEIELNWTPAPEPLCDKYFGCKNWSHSTCIANRCHCDSKYSWNASSLSCIQESSRNHSTNRSRMILGIICIAIIILTCIGVLAYVRRNKIANRLDKVSVRIQESLYDSEKHVKDLIGLGSLEENEGESIEVPYYTFRSIRAATNNFSDSNKLGQGGYGPVYKGRFPGGQDIAIKRLSSVSTQGLQEFKNEVVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMSNKSLDSFIFG* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6137 762 Gene3D Phosphorylase Kinase; domain 1 647 750 - -
Psa5g6137 762 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 761 - -
Psa5g6137 762 ProSiteProfiles PAN/Apple domain profile. 337 427 IPR003609 -
Psa5g6137 762 ProSiteProfiles Bulb-type lectin domain profile. 24 152 IPR001480 -
Psa5g6137 762 PIRSF SRK 549 762 IPR024171 GO:0004674
Psa5g6137 762 PIRSF SRK 1 444 IPR024171 GO:0004674
Psa5g6137 762 Pfam PAN-like domain 345 407 IPR003609 -
Psa5g6137 762 ProSiteProfiles Protein kinase domain profile. 675 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6137 762 Gene3D - 17 152 IPR036426 -
Psa5g6137 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 179 IPR036426 -
Psa5g6137 762 SUPERFAMILY Protein kinase-like (PK-like) 657 761 IPR011009 -
Psa5g6137 762 Pfam Protein tyrosine and serine/threonine kinase 678 760 IPR001245 GO:0004672|GO:0006468
Psa5g6137 762 Pfam S-locus glycoprotein domain 246 315 IPR000858 GO:0048544
Psa5g6137 762 Pfam D-mannose binding lectin 79 169 IPR001480 -
Psa5g6137 762 SMART blect_4 29 154 IPR001480 -
Psa5g6137 762 CDD B_lectin 35 154 IPR001480 -
Psa5g6137 762 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6137 Psa-Chr5 525736680 525740519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6137 594 761 Receptor kinase-like Gene Family AT4G23320 46.429 1.37e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g6137 PK_Tyr_Ser-Thr 6.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6137 - - gmx:100807185 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6137 5 525736680 525740519 Psa5g6137 5 525736680 525740519 ECH