Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6124 ATGGAGTTTAACCTTGAAAACCCTCTTGAAAACTTTCATGACCTTCCTAATTCTCAATGTGTTTCTTCCCTTTTCCTCATTGAATCTGACCATATCCCTCCACAAACTTACTTCCAAACCCTCAAATCAAACGAGTTTGATGCCTCACTTAGAACTGATTTCATCTCTTTAATCTCACAGTTGTCATGCACCTTTGATCCATTTGTGACTTACCTAGCCATCAACTATTTGGATCGCTTCCTAGCTAACCAAGGAATAATGCAGCCAAAACCATGGGCCAACAAACTTGTTGCAGTAACATGTTTTTCTCTAGCACTAAAAATGTTGAAAACAGAGTACTCTACCACTGATGTTCAGGGTCATCTGAATCATGATGATGGTGGATTCATTTTTGAGACACAAACGATAAAAAGAATGGAAGCACTTGTGTTAGGAGCATTACAATGGAGAATGCGTTCCATTACTCCATTCTCTTTCATTCCTTACTTCACCAATTTGTTTAATCTTGATGATAATATAACATTAAAGGTTCTCAAAGATCGAGCTTCTCAAATTATATTCAAGTCACAAAAAGATGTAAAGGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCCCTTCTTTATGCTTCACATGAATTGTTTCCTTTTCAATATCCATGCTTCTTGGGAACAATATCCAATTCTTCCTATGTAAATAAAGAAAGTGTTATGGAGTGCTATAATGTAATACAAGATATATCTAAGTTGGAGTACGAATCAATGTTTAATGCAAATTCAAGTTCAGGCACACCAGTTAATGTGTTAGACGAAAATTTTCTAAGTTTGGAAAGTGAAAAAACCAATGGAACAAATCTTGATCCAACTACAATGAAACAAGAGAAGCATTTCAAAAGGAGGAAAATTTAA 912 0.352 MEFNLENPLENFHDLPNSQCVSSLFLIESDHIPPQTYFQTLKSNEFDASLRTDFISLISQLSCTFDPFVTYLAINYLDRFLANQGIMQPKPWANKLVAVTCFSLALKMLKTEYSTTDVQGHLNHDDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNLFNLDDNITLKVLKDRASQIIFKSQKDVKVLEFKPSIVAASSLLYASHELFPFQYPCFLGTISNSSYVNKESVMECYNVIQDISKLEYESMFNANSSSGTPVNVLDENFLSLESEKTNGTNLDPTTMKQEKHFKRRKI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6124 303 SMART Cyclin_C_2 154 269 IPR004367 -
Psa5g6124 303 MobiDBLite consensus disorder prediction 281 303 - -
Psa5g6124 303 SUPERFAMILY Cyclin-like 19 151 IPR036915 -
Psa5g6124 303 Gene3D - 23 243 - -
Psa5g6124 303 Gene3D - 34 152 - -
Psa5g6124 303 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 301 - -
Psa5g6124 303 CDD CYCLIN 53 144 IPR013763 -
Psa5g6124 303 Pfam Cyclin, C-terminal domain 154 250 IPR004367 -
Psa5g6124 303 SUPERFAMILY Cyclin-like 136 248 IPR036915 -
Psa5g6124 303 SMART cyclin_7 158 247 IPR013763 -
Psa5g6124 303 SMART cyclin_7 53 145 IPR013763 -
Psa5g6124 303 Pfam Cyclin, N-terminal domain 28 151 IPR006671 -
Psa5g6124 303 PANTHER CYCLINS 5 301 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6124 Psa-Chr5 524038925 524042060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6124 1 302 Core Cell Cycle Gene Families AT4G03270 44.409 1.36e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6124 K18812 - gmx:100799951 449.899