Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6107 ATGACAAAACCTGCGTATGTTGTTGTTTATGCCATTCTTATTTGCGCTATGGCCAATGGGGGTTCAGAGGGGATACGATGGAAACATGACGATTTTTATAAAGATCATGTTGGAGAAAAGGCAGAGCAGGTGTGGCGACATTGTAGACAAGAAATGATTGAGAGGAGTTATGGTATCAAAGAATTTGACTTGCGTTTATCAGATGAGACGAGGAGAAAGAGATCTAAATTTGTACCTCCCCATATGAAACAACACTTTTTGGATTGCTTAAGAAACAGAAATTATCCTATTCCTGTATCGGAAGAGGAGGGACATTTGTTGAAGAAGCATTATGAGTCACTCTTTGGTTTAGCAGATGGACATAGATATTTACTTTCAGAGTCATCGATTAATCAGACACCACCGAGCCCTGATTCCGTTCCATCATCTCCAAAACTGAAAAGTCATGTTGCAGCACAAACCACTTTTTCACCTTCAACTCCCGAGTTTTCGTTTCATGATTTGCCACTCCCTCCGAACGTGTTTGTGCCATTTTTACCATCACCTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCCTTCTCCTCTTTCTACTTTTAATCAGAAAGAAATTAGTGTTGCTGTAGTTGCATCAGGAATTATAATCTTAATAGGCTTGTTCTTATGCTGCCGCGAGGTGAGGAAGAGAAAAAAAGTTGACAAAGATATCAGGCCTTTACTCATATTAACCTCAAGCGACATGTCTAGTGGTAGTTCACAAAAGTCTATGACTTTCGAAAATAATGATTTGAAAGAATATGGTATTAACTACGGAATGAGTCCTCCTACTGTTAGGAAGTCGTTCAATAAGCATGAAGACAACAATGCCTCATTGGCTGAGATAACACCATCGGATAACAAAGAACAAATACCAGTATCTCCATTAAAACACCCTTCGCCATTAAAACACCCTTCAGTAAGATCAGCCCCTGAGGCTTCACCGTCACCGCCGCCTCCACCACCTGCTCTTGCACCTCGCCCTCCACCTCCTCCAAGAATGATTCGGCCTCCACCTCCTCCTCCCAAACAAATGGAAGGTCAAAACTTTAAATCACCTCTAGGACCACCTCGTGCTAGTGACGATGATGAGTCTGATGCTCCAAAACCGAAATTAAAGCCATTTTTCTGGGATAAGGTTGTAGCAAATCCTGATCAAGCCATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAGTGAAGAAAAGATAGAGTCTCTATTTGGCTGGGCCAACCAGAACAAAAATGAGAGAAAAAAAGATTCTCCATCTTTAGAACATTCGGTCCAGTACATTCAGATTATTGACCCCAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGAGCACAAAAGAAGTTATTGACGCCGTTAAAGAAGGTAATCAGATTCCCGTTGAGCTCATCCAAACAGTATTGAAGATGGCGCCAACAACAGATGAGGAATTGAAGCTAAGGTTATTCACGGGCGACGTTTCTCGACTTGGCTCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTGGCTTTCAAACGTCTTGAGGCACTACGGTTCATGTTTACACTTCCGGAAGAAGCTTCAAACATTAGGGAATGCTTTACAACATTAGAGGTTTCTTGCAACAAACTAAGGAAAAGCAGGGTTTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACTGGAAATCGCTTGAACAATGGAACCTATCGTGGTGATGCTCAAGCATTTAAGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGGAAGACCACACTGTTACACTTTGTGGTTCATGAGATCATTCGTTCAGAGGGCTTAAGAGCTGTAAGAACAGAAAAATCAAGCCAAAGCCATTCTAGTATGAAAGCCGAGGATTTCATTGGTGAATCAAATGGGGCATCAGAAGAGCACTATCGCTACCTTGGCCTTCAAGTTGTTTCAGGTCTAAGCACTGAACTAGAAGATGTGAAAAAGGCAGCAGTGATAGATGGTGATGCTCTAACATCTACAGTGTTGAGACTTTATAATATGTTGGTAAAATCTGAAGAATTGTTGAATACGGATCTGAAGAATCTAGAAGAAGATAGCGAGTTTCATCGTACCCTTGCAAATTTTGTGGAGAAGGCAAGAGAGGAAGTGATATGGTTAATAGGGGAAGAGAAGAGAATAACGACCGGGGTTAAGAGTACTGCAGATTATTTTCAGGGGAATACCGGAAAAGAAGAAGGGTTGCGTTTGTTTGTGATTGTACGTGATTTCTTGGTAATGTTGAACAAGGTGTGCAAAGAGGTACAAGCATCGACAACGAAGACAGTAGCTGCGAAAGGTTCTCCTACTAGCAAGAAAGAGGCTCCTTCATCCTCTCCAGATTCTAATCAACGATCACTCTCTGATATGCATAGGATACTATTTCCAGCCATATCAGAGAGGAGAATACATGACTCTAGTTCCTCGTCGTCCTCCTCCTCCGATGACGATGATGATGAGATGTTACCAACATAG 2568 0.421 MTKPAYVVVYAILICAMANGGSEGIRWKHDDFYKDHVGEKAEQVWRHCRQEMIERSYGIKEFDLRLSDETRRKRSKFVPPHMKQHFLDCLRNRNYPIPVSEEEGHLLKKHYESLFGLADGHRYLLSESSINQTPPSPDSVPSSPKLKSHVAAQTTFSPSTPEFSFHDLPLPPNVFVPFLPSPPPPPRPPPPPPPSPLSTFNQKEISVAVVASGIIILIGLFLCCREVRKRKKVDKDIRPLLILTSSDMSSGSSQKSMTFENNDLKEYGINYGMSPPTVRKSFNKHEDNNASLAEITPSDNKEQIPVSPLKHPSPLKHPSVRSAPEASPSPPPPPPALAPRPPPPPRMIRPPPPPPKQMEGQNFKSPLGPPRASDDDESDAPKPKLKPFFWDKVVANPDQAMVWHEIRAGSFQFSEEKIESLFGWANQNKNERKKDSPSLEHSVQYIQIIDPKKAQNLSILLRALNVSTKEVIDAVKEGNQIPVELIQTVLKMAPTTDEELKLRLFTGDVSRLGSAERFLKALVDIPLAFKRLEALRFMFTLPEEASNIRECFTTLEVSCNKLRKSRVFQKLLEAVLKTGNRLNNGTYRGDAQAFKLDTLLKLADVKGTDGKTTLLHFVVHEIIRSEGLRAVRTEKSSQSHSSMKAEDFIGESNGASEEHYRYLGLQVVSGLSTELEDVKKAAVIDGDALTSTVLRLYNMLVKSEELLNTDLKNLEEDSEFHRTLANFVEKAREEVIWLIGEEKRITTGVKSTADYFQGNTGKEEGLRLFVIVRDFLVMLNKVCKEVQASTTKTVAAKGSPTSKKEAPSSSPDSNQRSLSDMHRILFPAISERRIHDSSSSSSSSSDDDDDEMLPT* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6107 855 PANTHER FORMIN-RELATED 1 849 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa5g6107 855 SMART it6_source 375 794 IPR015425 -
Psa5g6107 855 PANTHER FORMIN-LIKE PROTEIN 1 849 - -
Psa5g6107 855 MobiDBLite consensus disorder prediction 313 341 - -
Psa5g6107 855 Pfam Formin Homology 2 Domain 377 779 IPR015425 -
Psa5g6107 855 MobiDBLite consensus disorder prediction 790 855 - -
Psa5g6107 855 MobiDBLite consensus disorder prediction 355 381 - -
Psa5g6107 855 ProSiteProfiles Formin homology-2 (FH2) domain profile. 375 805 IPR015425 -
Psa5g6107 855 MobiDBLite consensus disorder prediction 324 341 - -
Psa5g6107 855 Gene3D Formin, FH2 domain 381 816 IPR042201 -
Psa5g6107 855 SUPERFAMILY Formin homology 2 domain (FH2 domain) 330 790 - -
Psa5g6107 855 MobiDBLite consensus disorder prediction 790 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6107 Psa-Chr5 523040810 523046813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6107 342 787 FH2 protein (formin) Gene Family AT5G67470 44.934 1.00e-111 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6107 - - lja:Lj3g3v2888350.1 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6107 5 523040810 523046813 Psa5g6107 5 523040810 523046813 ECH