Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6093 ATGGAAAGTCTGAGTAAGTATTTCAAGGTTTTGATTATCTGTCTTTTGGCCGCATCGACTCATGCTCAATTGGAGCTTGGGTTTTATGCTAAGAGCTGTCCAAAAGCCGAACAGATCATTCAAAAATTTGTTCATGAACATATCCGCAATGTTCCATCGCTTGCGGCTGCGTTAATACGGATGCATTTTCATGATTGTTTTGTCAGGGGTGGTCCCTCTTGGAAAGTTCCTACAGGTAGAAGAGATGGAGTCATATCAAACTTGTCGGAATCCATTCAAAACATTCCTGCTCCATTTAACAACTTCACCACTCTCCAAACTCTCTTTGCCAATCAAGGACTTGATTTAAAAGATTTAGTCCTCCTCTCAGGTGCTCACACAATTGGAATTTCTCTTTGCACTTCATTTTCGAATCGTTTGTACAATTTTACTGGAAAGGGGTTCATGCCTAACATTAGCGACTATTTGAATTCAAGGCTACTTAAGGAGACATCATGGCTTGCATAA 507 0.4024 MESLSKYFKVLIICLLAASTHAQLELGFYAKSCPKAEQIIQKFVHEHIRNVPSLAAALIRMHFHDCFVRGGPSWKVPTGRRDGVISNLSESIQNIPAPFNNFTTLQTLFANQGLDLKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGFMPNISDYLNSRLLKETSWLA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6093 168 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 ProSitePatterns Peroxidases proximal heme-ligand signature. 118 128 IPR019793 -
Psa5g6093 168 PANTHER PEROXIDASE 9 70 - -
Psa5g6093 168 PANTHER PEROXIDASE 70 146 - -
Psa5g6093 168 Pfam Peroxidase 70 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 PANTHER PEROXIDASE 25-RELATED 70 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 PANTHER PEROXIDASE 25-RELATED 9 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Psa5g6093 168 SUPERFAMILY Heme-dependent peroxidases 21 151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 Gene3D - 70 95 - -
Psa5g6093 168 Gene3D Peroxidase, domain 2 96 154 - -
Psa5g6093 168 ProSiteProfiles Plant heme peroxidase family profile. 23 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g6093 168 Gene3D - 24 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6093 Psa-Chr5 522128239 522130746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6093 21 70 Peroxidase AT1G05260 72.000 6.97e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6093 K00430 - gmx:100803114 139.043