Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g6087 | ATGAATACCAACAACAACAGCAACAACTATAACATGTCTCCACTCTCTGATCATCAAAACAAACCCATCATTCATGAATTCGATTTTTTCTCTCTAAATAATACCAACCATGCCTCTACTTCTGCACCCCCCCTTCATCATTGCACCCCTTCTTCTCTTACTGAATCCAAAGTAAACACTAGTTTGAATCTTCTTACCACAAACACAAGCAGTGATCAATCCATGGTGGAACCTGACATATCAAATAAGTCAGAAGACAAAAGAGATAAGCTTGAGCTTGATGTTCTTCAAGCTGAGCTTGAGAGAAAGAAGGCGGAGAATCACAGGCTGAGGAACATGTTTGACGAAGCCAAGATGAATTACGAGGCGCTGCAAATGCATATGTTGAGTTTGATGCAGGAGAGAAGCGTAGAGGATTGTAAAGAAGAGGAACAAGAAGAAGAGAAGCCAAATGGGAATGGTGGAGTTTTGATTCCAAGACAAATTGTAGATCTTGCGAAAGACAACGAGGAAGGTTCTAAGGATGAAGAACTTGTGTTTGATCCTGACAAAGAGGAATCTGACCACGAAAATGAAAGAAATGATAGTCAAGTTTTAGCAGCTAATAATAATACTAATAATGTTTCAAATTTCAGTGCTCAAACTAATGTTGAAGAAGCTGAGGCAACGATGAAGAAAGCTAAAGTTTCGGTTCGAGCTCGGTCGGAGGCTAATATGATCAATGATGCGTGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAATCCGTTTCCTCGAGCTTATTATCGATGCACCATGGCTTTAAATTGTCCGGTGAAAAAACAGGTACAAAGGTGTGCTGAGGACAAATCAATATTAGTAACAACATATGAAGGAAATCACAACCATGCTTTGCCACCAGCAGCTATGGAAATGGTAAAACAAACATCAGCAGCAGCAAGAATGCTACTATCAGGGCCAATGACAAGTCCTGATGGACTAATGAATTCAAATTTTCTCACAAGAACAGTGTTTCCTTCTTCTTCAAGCATTGCAACTATTTCGGCATCAGCTCCATTTCCAACCATTACATTGGACTTAACTCAATCACCAAATAATCCATTACAGTTTCCTACTCAGACATTGTTTAATCAGTCAGGATTTTCAGGACTTCAAATGTCTCAAGATGCAGAAACTTCGCAATCTCAACAGATATCACAGAACCTTACAGCTGATCCTGACTTGACTGCAGTTTTGGTAGCTGCTATTACTTACATGATTGGGGTGGCACAACCAAACGATAATGACACAAAAACCAATAATAATAATGGCAATGTTATATAA | 1329 | 0.3935 | MNTNNNSNNYNMSPLSDHQNKPIIHEFDFFSLNNTNHASTSAPPLHHCTPSSLTESKVNTSLNLLTTNTSSDQSMVEPDISNKSEDKRDKLELDVLQAELERKKAENHRLRNMFDEAKMNYEALQMHMLSLMQERSVEDCKEEEQEEEKPNGNGGVLIPRQIVDLAKDNEEGSKDEELVFDPDKEESDHENERNDSQVLAANNNTNNVSNFSAQTNVEEAEATMKKAKVSVRARSEANMINDACQWRKYGQKMAKGNPFPRAYYRCTMALNCPVKKQVQRCAEDKSILVTTYEGNHNHALPPAAMEMVKQTSAAARMLLSGPMTSPDGLMNSNFLTRTVFPSSSSIATISASAPFPTITLDLTQSPNNPLQFPTQTLFNQSGFSGLQMSQDAETSQSQQISQNLTADPDLTAVLVAAITYMIGVAQPNDNDTKTNNNNGNVI* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g6087 | 442 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 13 | 434 | IPR044810 | GO:0003700 | |
Psa5g6087 | 442 | SMART | WRKY_cls | 240 | 300 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6087 | 442 | PANTHER | WRKY TRANSCRIPTION FACTOR 6 | 13 | 434 | - | - | |
Psa5g6087 | 442 | MobiDBLite | consensus disorder prediction | 66 | 88 | - | - | |
Psa5g6087 | 442 | ProSiteProfiles | WRKY domain profile. | 235 | 301 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6087 | 442 | Coils | Coil | 81 | 120 | - | - | |
Psa5g6087 | 442 | Gene3D | WRKY domain | 225 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6087 | 442 | Pfam | WRKY DNA -binding domain | 241 | 298 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6087 | 442 | MobiDBLite | consensus disorder prediction | 164 | 194 | - | - | |
Psa5g6087 | 442 | MobiDBLite | consensus disorder prediction | 135 | 194 | - | - | |
Psa5g6087 | 442 | SUPERFAMILY | WRKY DNA-binding domain | 233 | 301 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g6087 | Psa-Chr5 | 521666050 | 521667811 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g6087 | 58 | 438 | WRKY Transcription Factor Family | AT1G62300 | 47.045 | 4.23e-102 | 313 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Psa5g6087 | WRKY | 2.2e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g6087 | - | - | cam:101511587 | 419.853 |