Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6052 ATGTCACTACCACCGATAACACCACCGTCGCTCGCAACTTCTTTCACGGCAAAGCCAACACAACCACCGATCCGACAGATTCCGGGAAGTCACGGATGGCCAATACTAGGTCCTCTCTCAGATAGATTAGACTATTTCTGGTTCCAGAAGCCAGAAAGCTTCTTCAGAACACGAATGGAAAAGTACAAAAGCACCGTGTTCCGTACAAATATTCCTCCAACGTTTCCGTTTTTCACCAGCGTAAATCCCAACGTTATTGCACTCCTCGATTGCAAGGCTTTCTCTCACCTCTTGGACATGGAGTTAGTTGACAAAAAAGATGTTCTGGTTGGAGATTTTGTCCCTAGCGTTGAATTCACTGGGAATATTAGGGTTGGTGTTTACAGAGATGTTTCTGATCCTCAACATTCTAAGTCAAAGAAGTTCTCCATGCAAGTATTGAAAGAAAGCTCAAGCATATGGGTACCCGAACTGGTTTCAAATCTAGACATATTTTTGGACCAAATTGAAGCAACGTTGTCCACATCTTCATCCGCAAGTTACATGTTCCCGCTACAACAATTTTTGTTCAAGTTCCTCTTCAAAGTCCTTGCTAAAGCCGACACTTCCCTCGATCCGAAAATCGCAGAATCCGGCTACTCCATGCTCAACAAATGGCTTGCACTTCAGCTTTTACCTACGATCAGTATTGGCAAAGTGCAACCCCTTGAAGAACTCTTTCTTCATTCCTTTTCTTATCCTTTCTCTCTTGTTAAAGGAGATTACAACAGCCTCTACAACTTTGTTAAACAACATGGTAAGGAAGTGGTGAAATGTGGAAAAGAGTTTGGATTGAATGAAGATGAAGCAATCCACAACTTACTTTTCATTTTGGGTTTCAACTCATATGGTGGATTTTCAATTTTCCTTCCAAATTTGATAAACACCATAGCGAATGACTCGACCGGTTTGCAAGAGAAGTTGAGAAACGAAGCAAGAGAGAAATGCGGTTCAACTCTCGGGTTTGACTCGTTGAAAAACTTGGAGCTAATTAATTCAGTAGTTTACGAAACCCTTCGGATGAACCCTCCGGTTCCGCTTCAGTTCGGTCGAGCCAGAAAGGATTTTCAGCTCAGTTCAAATGACTCACTATTCAATGTGAAAAAAGGCGAGTTATTATGTGGTTATCAGAAGCTTGTAATGAGAGACCCGGCCGTGTTTGACGAACCGGAGAGTTTTAAACCGGATCGGTTCACTAAAGAGAAAGGAGCCGAGTTGTTGAACTATTTGTATTGGTCTAATGGACCGCAATCCGGTTCGCCAAGCGTGGCCAATAAACAGTGTGCAGGTAAGGACATTGTGACCTTCACTTCTGCCTTAATTGTGGCACACTTGCTTCGTAGGTATGATTCAATTAAAGGGGATGGTAGTTCCATAACTCTCTTAACAAAGGCCAAATGA 1440 0.4264 MSLPPITPPSLATSFTAKPTQPPIRQIPGSHGWPILGPLSDRLDYFWFQKPESFFRTRMEKYKSTVFRTNIPPTFPFFTSVNPNVIALLDCKAFSHLLDMELVDKKDVLVGDFVPSVEFTGNIRVGVYRDVSDPQHSKSKKFSMQVLKESSSIWVPELVSNLDIFLDQIEATLSTSSSASYMFPLQQFLFKFLFKVLAKADTSLDPKIAESGYSMLNKWLALQLLPTISIGKVQPLEELFLHSFSYPFSLVKGDYNSLYNFVKQHGKEVVKCGKEFGLNEDEAIHNLLFILGFNSYGGFSIFLPNLINTIANDSTGLQEKLRNEAREKCGSTLGFDSLKNLELINSVVYETLRMNPPVPLQFGRARKDFQLSSNDSLFNVKKGELLCGYQKLVMRDPAVFDEPESFKPDRFTKEKGAELLNYLYWSNGPQSGSPSVANKQCAGKDIVTFTSALIVAHLLRRYDSIKGDGSSITLLTKAK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6052 479 Pfam Cytochrome P450 317 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PANTHER CYTOCHROME P450 26 17 475 - -
Psa5g6052 479 SUPERFAMILY Cytochrome P450 22 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PRINTS E-class P450 group IV signature 378 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PRINTS E-class P450 group IV signature 441 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g6052 479 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 17 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6052 Psa-Chr5 518437889 518445301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6052 100 479 Cytochrome P450 AT4G15440 59.115 6.69e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6052 K10528 - gmx:100784395 717.613