Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6034 ATGGATCCCTTGATCCGCAAGCTCCGGCGCCACCTTCTCCGTTGGCTTCACCGATCTCGTTCTGGATCCGTGTTTTTTGTGAGGAGAATTTCGTATAAGGAAGTTAGAAAAGCAACTGATAGTTTTCAAAGAATAGTTTATAGCAATTCCGAAGTTTCTGCGTATGCTGCGAATTTTGGAGAGGGATGCGGTGGTGTTTGTTTGGTGAAAGAAGTTAAAGATTTTGATAAAGGAAATGATGAGAATTTTCATAAGCAAGTGCAGTTGTTGGGACGTTTGCATCATCGACACCTTCTTTCGCTCAAAGGCTTTTCTTTGGGGCACGATCGCAAGAGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGTTTAAAGGAGCATCTCAATGACCCCTTGAAGACTCCTTTAAATTGGAGGACAAGGTTGCAAATAGCTAATGGTGTTGTGGCTGCACTGGAATACTTGTTTCTTTTCAGTGAACCACCAATAAGCCATGTCTCTATTAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCTAAACTTTCTGATTTTGGCCTTCTTACTGGTGGAAGTTCTGTCATGATGACACAAGATTGCACGGGGCAGGAAAATTGTAAGATTATATTTCAACTTGGAGTGCTCATCCTTGAACTTGTCACCGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATTCAAGAATCCCGATTTTTCAGTTCCATTGATAAGATGTTAGATCCTGATCTTGGAAACAATTATGATGGTACAGAACTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAATTCCTCAGTTATTTCGGTATCTCCAAAAGGAGACTGATATTCCCCAACATTAG 909 0.4015 MDPLIRKLRRHLLRWLHRSRSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGEGCGGVCLVKEVKDFDKGNDENFHKQVQLLGRLHHRHLLSLKGFSLGHDRKSKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSVMMTQDCTGQENCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNNYDGTELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIPQH* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6034 302 Gene3D Transferase(Phosphotransferase) domain 1 212 302 - -
Psa5g6034 302 ProSiteProfiles Protein kinase domain profile. 10 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g6034 302 PANTHER OS01G0253100 PROTEIN 1 298 IPR045271 GO:0004714|GO:0006468
Psa5g6034 302 Gene3D Transferase(Phosphotransferase) domain 1 121 209 - -
Psa5g6034 302 Gene3D Phosphorylase Kinase; domain 1 17 119 - -
Psa5g6034 302 SUPERFAMILY Protein kinase-like (PK-like) 25 234 IPR011009 -
Psa5g6034 302 Pfam Protein tyrosine and serine/threonine kinase 67 193 IPR001245 GO:0004672|GO:0006468
Psa5g6034 302 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6034 Psa-Chr5 517452577 517455996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6034 22 302 Receptor kinase-like Gene Family AT3G19300 36.013 1.08e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Psa5g6034 PK_Tyr_Ser-Thr 5.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6034 - - aprc:113853565 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6034 5 517452577 517455996 Psa5g6034 5 517452577 517455996 ECH