Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6032 ATGTTTGGGCGAGGAGCACCGAAGAAAAGCGATAACACAAAATATTATGAGATTCTCGGCGTTTCGAAGACCGCTTCTCCTGATGATTTGAAGAAAGCTTACAAAAAAGCTGCCATCAAGAATCATCCTGATAAGGGAGGTGATCCTGAGAAGTTCAAAGAGCTTGCTCAAGCTTATGAGGTTTTGAGTGATCCCGAGAAACGTGAGATATATGATCAATACGGTGAAGATGCGCTTAAGGAAGGAATGGGTGGCGGCGGCGGTGGCCATGACCCATTTGATATCTTTTCGTCTTTCTTTGGTGGTGGTGGATTTCCAGGTGGTGGTAGTAGAGGCCGAAGGCAGAGACATGGGGAAGATGTTGTTCACCCCTTGAAGGTCTCTTTGGAGGATCTTTACCTTGGGACATCTAAGAAGCTTTCTCTCTCAAGAAATGTCTTGTGTTCCAAGTGCAATGGGAAAGGGTCTAAGTCTGGGGCTTCCATGACATGTTCTGGTTGTGATGGAACTGGTATGAAGATTTCTATGAGGCATCTGGGTGCCAACATGATTCAGCAAATGCAACATCCTTGCAATCAATGTAAGGGTACTGGAGAGACAATTACTGACAAAGATCGATGCCAACAGTGCAAGGGAGAGAAGGTTGTTCAACAGAAGAAAGTACTTGAAGTTCATGTTGAAAAGGGAATGCAGAACGGGCAGAAAATTACGTTCCCTGGTGAAGCTGATGAAGCGCCGGATACAGTTACTGGAGATATTGTATTTGTACTTCAACAGAAGGAGCATCCGAAGTTCAAAAGAAGTGGTGATGATCTTTTTGTAGAGCACACCTTGTCCCTCACTGAAGCCTTATGTGGTTTCCAGTTCGCCCTGACTCATTTGGATGCTCGGCAACTGTTGATTAAATCAAATCCCGGAGAAGTTGTCAAGCCTGATTCATATAAGGCAATTAATGATGAGGGCATGCCAATGTACCAGAGGCCATTCATGAAGGGCAAGCTTTACATTCACTTCACTGTGGAGTTTCCCGAGTCTCTGTCTCCTGATCAGGTCAAGGCTTTGGAGACAATTCTGCCAGCACGGCCTTTATCACAGTTGACAGAAATGGAGATAGATGAGTGTGAGGAGACAACACTTCATGATGTCAACATGGAGGAAGAGTCAAGGAGGAAGAAGCAAGCTCCGCAAGAGGCTTATGACGAGGATGATGAAATGCCTGGTGGTGCTCAGAGAGTCCAATGCGCTCAGCAGTAA 1254 0.4561 MFGRGAPKKSDNTKYYEILGVSKTASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGGFPGGGSRGRRQRHGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGASMTCSGCDGTGMKISMRHLGANMIQQMQHPCNQCKGTGETITDKDRCQQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRSGDDLFVEHTLSLTEALCGFQFALTHLDARQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVEFPESLSPDQVKALETILPARPLSQLTEMEIDECEETTLHDVNMEEESRRKKQAPQEAYDEDDEMPGGAQRVQCAQQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6032 417 MobiDBLite consensus disorder prediction 377 417 - -
Psa5g6032 417 Gene3D - 111 260 - -
Psa5g6032 417 SUPERFAMILY Chaperone J-domain 9 110 IPR036869 -
Psa5g6032 417 MobiDBLite consensus disorder prediction 377 407 - -
Psa5g6032 417 Pfam DnaJ C terminal domain 122 343 IPR002939 -
Psa5g6032 417 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Psa5g6032 417 SMART dnaj_3 13 67 IPR001623 -
Psa5g6032 417 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Psa5g6032 417 Gene3D - 148 214 - -
Psa5g6032 417 PRINTS DnaJ domain signature 16 34 IPR001623 -
Psa5g6032 417 PRINTS DnaJ domain signature 47 67 IPR001623 -
Psa5g6032 417 PRINTS DnaJ domain signature 67 86 IPR001623 -
Psa5g6032 417 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Psa5g6032 417 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 417 IPR044713 GO:0006457|GO:0030544
Psa5g6032 417 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 7 417 - -
Psa5g6032 417 Hamap Chaperone protein DnaJ [dnaJ]. 11 404 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa5g6032 417 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
Psa5g6032 417 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Psa5g6032 417 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
Psa5g6032 417 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 354 IPR008971 GO:0006457|GO:0051082
Psa5g6032 417 SUPERFAMILY HSP40/DnaJ peptide-binding domain 119 263 IPR008971 GO:0006457|GO:0051082
Psa5g6032 417 Gene3D - 262 344 - -
Psa5g6032 417 CDD DnaJ_C 119 346 - -
Psa5g6032 417 Pfam DnaJ domain 14 72 IPR001623 -
Psa5g6032 417 CDD DnaJ 15 64 IPR001623 -
Psa5g6032 417 Gene3D DnaJ domain 11 110 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6032 Psa-Chr5 517423982 517426951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6032 5 74 C2H2 Transcription Factor Family AT1G74250 40.506 4.99e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6032 K09503 - twl:119980998 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6032 5 517423982 517426951 Psa5g6032 5 517423982 517426951 ECH