Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6028 ATGCTGTCGAACCAACCTCTTACTCTGCATCCGGATAAAAACAAGTTAGTGGGTGCAGACGACACATTTAAGCTGGTTTCTCAGGCTTGGACTGTATTATCTGATAAAGCTAAGAGAGCTGCCTTTGATCAGAAGTGCCGCTTATGGGAGTCCTTCAAAAAGATTACTGGTGGTATACCTCAGAATAGTTTGTTTAATGCTGCTAACCGGAAGGACAGAGATCTCACGAGTGGTGCTCATGCCAATCCTACTCCAAGACCTTCTGTATCTGCTCGTTATAGTGGTTTGTTTAGTTCTGATACCGGGAAGGACATAGATCATATGAGTGCTGCTCACACCAATCCTACTCCAAATGCCCCACTTGATAAACAACCTTCATTTTGGACTGTGTGCAGTTTCTGCAGGACACATTATGAGTACTTTACAGTTTATAAAAACTGCAATATTGTTTGTGCCGGCTACAAGAAGCCATTTTTTGCTTCTGAGACACCACCCCCGCCTTTAATCGCAAATGCTTCCCCCACTTTAAGAGTTGCTTTGTTGAAGCAGCATAAGTTCAACTCAACCGGATTGGTAAGAAAACAACCATGTTTCAAGCCATCTGTGAATTTTAAGAGAAGGCATGAAGATTCGCCACCTCTCATGAGTGAGGAGACACATTTAGGGAAAACTCATGTTGTTGAAAGAACTGTTACAGGTTCAGATTTTCAGCCTTCTTGA 720 0.4264 MLSNQPLTLHPDKNKLVGADDTFKLVSQAWTVLSDKAKRAAFDQKCRLWESFKKITGGIPQNSLFNAANRKDRDLTSGAHANPTPRPSVSARYSGLFSSDTGKDIDHMSAAHTNPTPNAPLDKQPSFWTVCSFCRTHYEYFTVYKNCNIVCAGYKKPFFASETPPPPLIANASPTLRVALLKQHKFNSTGLVRKQPCFKPSVNFKRRHEDSPPLMSEETHLGKTHVVERTVTGSDFQPS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6028 239 Gene3D DnaJ domain 4 107 IPR036869 -
Psa5g6028 239 ProSiteProfiles dnaJ domain profile. 1 46 IPR001623 -
Psa5g6028 239 PANTHER BNAC03G44070D PROTEIN 7 225 - -
Psa5g6028 239 PANTHER HEAT SHOCK PROTEIN-LIKE 7 225 - -
Psa5g6028 239 Pfam DnaJ domain 7 43 IPR001623 -
Psa5g6028 239 SUPERFAMILY Chaperone J-domain 7 52 IPR036869 -
Psa5g6028 239 CDD DnaJ 7 35 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6028 Psa-Chr5 517113166 517113967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6028 7 168 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 29.012 8.36e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6028 - - mtr:MTR_3g099170 244.588