Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g6015 | ATGGATCCCAACAAGAACAAGAACAACAACATGTCTCCATCCAAAACAATCCCCTTTCAAGTCAACCTTAACTCTGATCATCAAAACAGACCCATCATTCGTGAATTGGATTTCTTCTCTCCAAATAACAACAACAACCATGCTTCTACTTCTGCACCTCCCAATCCTTATATACATGATCATTACACCCCTTCTCCTCCCTTTGAGATGAAAGTTAACACAAGTTTGAATCTTCTTACCACAAACACAAGCAGTGATCAATCAGTGGTGGAAGCTGATATATCAACTAGTTCACAAGACAGAAGACCTAACCTTGAGCTGGTTAATCTTCAAGCTGAGCTTGAGAGAAAGAAGGTGGAGAATCACCGGCTGAGGAACATGTTTGATGAGGCTAAGATGAATTACAACACGCTGAATATGCATCTCATGAGTTTGATGCAAAAGGGGAAGGTAGAGGATTGTAATGAAGAAGAGTTAGAAGAAGAGAAACCAAATGGGAATGGTGGAGTTTTGGTTCGAAGACAATTTATTGATCTTGGATTGGCTAGTAATGATTCTGATGCTGTTGATGAACCAAGAAGTCAAGATCAGTCAAAATCACTTGCGAACAACGTTGATGAAGGTTCCAAGGATGAAGAACTCGTGTTTGATCATGAGAAGAATGAATCTGATCGGGGAAATGATCGAAACGATAGTCCTTCGAATCAAGTTTTAGCTGCTAATAGTAGTCCTCAAAGTAGTGTTGAACAAGCTGAGGCTACCATGAGGAAAGCTAGGGTTTCTGTTCGAGCTCGATCGGAAGCTAATATGATCAATGATGGGTGTCAATGGAGAAAATATGGACAGAAAATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGTCTATAGGTTGTCCAGTGAGAAAACAGGTACAAAGGTGTGCCGAAGATAAATCAATACTAGTAACAACATACGAAGGAAATCACAATCACTGCTTACCGCCAGCAGCAAAGGAAATGGTACATCAAACATCGTCGGCTGCAAGAATGTTACTCTCGGGTCCAATGACAAGTCCTGACGGACTAATGAACCCGAATTTTCTCACAAGAACAATGTTTCCTTCTTCTTCAAGCATTGCAACAATCTCCGCATCAGCTCCATTTCCAACCATTACATTGGACTTAACTCAATCACCAAATAATCCATTACAGTTCCCTAACCCTAACCTCTCAAACCAGTTCCAGTTTCCTTTCCCTCAGACATTGTTTAATCAGTCAAGATTTTCAGGACTGCAAACATCTCAAGATCCAGAAACTTCTACGTCTCGACAGATGTCGCAGAATCTTGCTGACAAAGTTACTGCTATTGCAAAAGATCCTAACTTCACTGTAGCTTTGGCTGCTGCTCTTACTTCCATTATTAAGGCATTTCCGAACAATGATGATAGTACGGTTGATAATGGTGACAATACAACTGCTAATAACAGTAATGGCAATGTTACATCAAGTAACAATTCCAATGAAAGCAATATAACCAACAATCCCAGTTCTTCAGGAAACTAG | 1557 | 0.4053 | MDPNKNKNNNMSPSKTIPFQVNLNSDHQNRPIIRELDFFSPNNNNNHASTSAPPNPYIHDHYTPSPPFEMKVNTSLNLLTTNTSSDQSVVEADISTSSQDRRPNLELVNLQAELERKKVENHRLRNMFDEAKMNYNTLNMHLMSLMQKGKVEDCNEEELEEEKPNGNGGVLVRRQFIDLGLASNDSDAVDEPRSQDQSKSLANNVDEGSKDEELVFDHEKNESDRGNDRNDSPSNQVLAANSSPQSSVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMSIGCPVRKQVQRCAEDKSILVTTYEGNHNHCLPPAAKEMVHQTSSAARMLLSGPMTSPDGLMNPNFLTRTMFPSSSSIATISASAPFPTITLDLTQSPNNPLQFPNPNLSNQFQFPFPQTLFNQSRFSGLQTSQDPETSTSRQMSQNLADKVTAIAKDPNFTVALAAALTSIIKAFPNNDDSTVDNGDNTTANNSNGNVTSSNNSNESNITNNPSSSGN* | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g6015 | 518 | Pfam | WRKY DNA -binding domain | 272 | 329 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6015 | 518 | MobiDBLite | consensus disorder prediction | 483 | 518 | - | - | |
Psa5g6015 | 518 | Coils | Coil | 107 | 134 | - | - | |
Psa5g6015 | 518 | SUPERFAMILY | WRKY DNA-binding domain | 264 | 332 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6015 | 518 | MobiDBLite | consensus disorder prediction | 230 | 250 | - | - | |
Psa5g6015 | 518 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 13 | 501 | IPR044810 | GO:0003700 | |
Psa5g6015 | 518 | MobiDBLite | consensus disorder prediction | 205 | 229 | - | - | |
Psa5g6015 | 518 | MobiDBLite | consensus disorder prediction | 183 | 250 | - | - | |
Psa5g6015 | 518 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6015 | 518 | Gene3D | WRKY domain | 256 | 333 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6015 | 518 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Psa5g6015 | 518 | PANTHER | OS05G0567200 PROTEIN | 13 | 501 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g6015 | Psa-Chr5 | 516446279 | 516449131 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g6015 | 72 | 479 | WRKY Transcription Factor Family | AT1G62300 | 48.064 | 1.71e-115 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Psa5g6015 | WRKY | 1.7e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g6015 | - | - | cam:101511587 | 477.633 |