Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5998 ATGTGTAACATCTTTTATTCCTCTGAGCAGTTGAATGAACTAAACAACAGAATACTAGAAGAATCCATGGAAGTGAAGAAGATTATTTTCAAGGAAGAGATGGCCAATGAATTAGAAAATCAAGAAAAAGAGAAATATGAAGCTGCAATAAGAGAGGCTGAATATTTGAAACAATGTGCTAAAAGAGAAGCTGCAAAAAGAAAAGGAACAAGGTTGAAAGTTATCCATGCTACCAAAGAGAAAGAAAAACTCAAGGATTCTCTGAGTAGCTCCATGCCTCAGTACCGAGTGTTTACATGGGATGAAATAGTTTCAAATTCATCTTTCTCTGAAAACCTGAGAATCAGAATTGGTCCATATGAAATGGTGTACAAGTGTACTTTAATACCAATGTGCTAG 399 0.3509 MCNIFYSSEQLNELNNRILEESMEVKKIIFKEEMANELENQEKEKYEAAIREAEYLKQCAKREAAKRKGTRLKVIHATKEKEKLKDSLSSSMPQYRVFTWDEIVSNSSFSENLRIRIGPYEMVYKCTLIPMC* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5998 132 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 6 128 - -
Psa5g5998 132 PANTHER OS02G0152300 PROTEIN 6 128 - -
Psa5g5998 132 Coils Coil 31 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5998 Psa-Chr5 515566411 515566809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5998 5 128 U-box Gene Family AT4G25160 45.600 6.91e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5998 - - gmx:100801699 137.117