Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5991 ATGGCACTCTCGTTTTGCATAAGGTTTGAAATAAAGAAACAAGTTGTATTGATATACTACTTATGGGTTTGGTGGATTACTAGTATTTGTGTTAAAGCAAGAAATGTTAGTCTGATGGCAGGTGAAAGACTGGTTTCCAACTCCAGTCTATGTTCTACGCAAGGCAGGTATTGTCTATCATTCGGCGGAACACTAAATAGAGAGTATACTCACTTGGTTATAGTAAGTAATGCTAGTTTTGATCGTGGAGCAGTAATATGGTTGCATGCTAGAAACCAACCGGTTGATACTAAATCAGCGGTTTTATCTCTAAACAAGTCTGGTGTGCTCAAAATTGAATTTCAATATAGCAAAGAAATAATCATTTACTCTTCACCTCAACCTATAGACAATACTGTCGCTACTATGCTAGACACAGGTAACTTTGTACTCGAACAACTTCACCCCAATGGAACAAAGAGTTTACTGTGGCAGAGTTTTGATTATCCATTTAACGCTTTGGTCCCAAAGATGAAGTTAGGTGTTAATCGGAAAACTGGACATAATTGGTCATTAGTTTCGTGCTTAACTTTTTCACTAATAACTTTGGGTGAATTTAGTCTTGAATGGGAACCAAAAGAAGGTGAACTGAACATTAAGAGACTCGGGAAAGTGTATTGGAAAAGCGGAAAACTTGGAAATAATGGATTGTTCGAAAATGTTCCAGCAAATGTTCAACAAAATTATCAGTACGTTATTATCTCTAACAAGGATGAAGATTCTTTCAGTTTCGAAATTAAATATGAAGACCGGAATTATAAGATGTCCCCAGAGTGGTGGCTATCCTATAAGGGGAAGCTCATGGGTTCGGAAGGAGAGTTAGCAAATGCAGATATTTGTTATGGATATAATAGTGATAGAGGATGCCAAAAATGGGATATACCAACTTGTAGGAAACCCGGTGAGGTGTTTCAGAAAAAGATAGGCCAACCCGACCTTGACTACGCTGTCCTCCAAGACAGTAAGAGTATTGATTACAATGATTGCAAGGCGAGATGCTGGAGAAACTGTGGTTGCAATGGATTCCAAGAATATCATAATAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAAAATGTTGATGGGGAGAGTTTGAATTACTTTTACCTCTTGGAAAAGCCAGCAAAGTTACCTCTCGGTAAAAGAAGGTGGATATGGATAAGTGCAGCAATAGCAACTGCTTTACTCATAATATGCTCCCTCATTCTATGGATAGCAATAAAGAAACATAAATATGGACTTAAAGAGAAGAAAGTTAAAAGAAAGGAGAATGAGATGCAAGAGTTGGCTGCTTCCAATGAATTATATAGTATCAATGATCTTGAAGTTGATTTCAAGGGACATGATATAAAAGTTTTTAGCTACGCATCAATTTTAGAAGCAACTATGGACTTTTCCCCTGAAAATAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTGGCAACCGGGCAACAAGTTGCTGTAAAGAGACTTTCAAAAACTTCTGGACAAGGAGTTATTGAATTCAAAAATGAATTGGTACTGATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGTATTCATCAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATTTATTTGATTCTACAAAAAGGAAGTTACTCGATTGGAAAAAGCGCTTCAATATTATAGAAGGAGTTTCTCAGGCAATACTCTATCTTCATAAATATTCAAGATTAAAAATCATTCATAGAGACTTAAAAGCTAGCAACATACTTCTTGATGATAATATGAGTCCAAAAATTTCTGACTTTGGCATGGCAAGAATTTTCTCACAGCAGGAATCAACAGTAAATACCAATAGGATTGTCGGGACATATGGATACATGTCTCCTGAATATGCTATGGAAGGAATTTGTTCTACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTACTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTCTATGATGTTGATCGTCCACTTAACCTAATAGGTCATGCATGGGAGCTATGGAATGATGGTGAGTATATGCAGTTAATGGATCCATCATTAAGTGACTCATTTGTTCCTGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTGTGTGTAGAACATTATGCAAATGATCGACCTACAATGTCTGATGTTATATCGATGTTGACAAACAAATATGAACATGTTACTTTACCAAAAAGACCAGCATTCTATGTTAGAAGAGATTTCTTCCAGGAGGAAACAACTTCAAAAGTTCTGGACACTGACTCCTATTCTACGACTGTAATTTCCTCTTCGGAAGTAGAAAGGCAAGAAATAAGTTTATCTAGTATAAAAGATTGTTGA 2436 0.3621 MALSFCIRFEIKKQVVLIYYLWVWWITSICVKARNVSLMAGERLVSNSSLCSTQGRYCLSFGGTLNREYTHLVIVSNASFDRGAVIWLHARNQPVDTKSAVLSLNKSGVLKIEFQYSKEIIIYSSPQPIDNTVATMLDTGNFVLEQLHPNGTKSLLWQSFDYPFNALVPKMKLGVNRKTGHNWSLVSCLTFSLITLGEFSLEWEPKEGELNIKRLGKVYWKSGKLGNNGLFENVPANVQQNYQYVIISNKDEDSFSFEIKYEDRNYKMSPEWWLSYKGKLMGSEGELANADICYGYNSDRGCQKWDIPTCRKPGEVFQKKIGQPDLDYAVLQDSKSIDYNDCKARCWRNCGCNGFQEYHNNGTGCIFYSWNSTQNVDGESLNYFYLLEKPAKLPLGKRRWIWISAAIATALLIICSLILWIAIKKHKYGLKEKKVKRKENEMQELAASNELYSINDLEVDFKGHDIKVFSYASILEATMDFSPENKLGQGGYGPVYKGILATGQQVAVKRLSKTSGQGVIEFKNELVLICELQHTNLVQLLGCCIHQEERILIYEYMPNKSLDFYLFDSTKRKLLDWKKRFNIIEGVSQAILYLHKYSRLKIIHRDLKASNILLDDNMSPKISDFGMARIFSQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDVDRPLNLIGHAWELWNDGEYMQLMDPSLSDSFVPDEVKRCIHVGLLCVEHYANDRPTMSDVISMLTNKYEHVTLPKRPAFYVRRDFFQEETTSKVLDTDSYSTTVISSSEVERQEISLSSIKDC* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5991 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 184 IPR036426 -
Psa5g5991 811 PIRSF SRK 9 302 IPR024171 GO:0004674
Psa5g5991 811 PIRSF SRK 289 803 IPR024171 GO:0004674
Psa5g5991 811 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 777 - -
Psa5g5991 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Psa5g5991 811 ProSiteProfiles Protein kinase domain profile. 481 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5991 811 Gene3D Phosphorylase Kinase; domain 1 422 556 - -
Psa5g5991 811 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 777 - -
Psa5g5991 811 Gene3D Transferase(Phosphotransferase) domain 1 557 764 - -
Psa5g5991 811 SMART serkin_6 481 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5991 811 Pfam D-mannose binding lectin 85 187 IPR001480 -
Psa5g5991 811 SMART blect_4 35 163 IPR001480 -
Psa5g5991 811 Pfam Protein tyrosine and serine/threonine kinase 484 751 IPR001245 GO:0004672|GO:0006468
Psa5g5991 811 ProSiteProfiles Bulb-type lectin domain profile. 35 157 IPR001480 -
Psa5g5991 811 Pfam PAN-like domain 323 368 IPR003609 -
Psa5g5991 811 SUPERFAMILY Protein kinase-like (PK-like) 466 777 IPR011009 -
Psa5g5991 811 Gene3D - 30 160 IPR036426 -
Psa5g5991 811 Coils Coil 428 455 - -
Psa5g5991 811 CDD STKc_IRAK 487 754 - -
Psa5g5991 811 ProSiteProfiles PAN/Apple domain profile. 310 391 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5991 Psa-Chr5 515425521 515429323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5991 417 770 Receptor kinase-like Gene Family AT3G45860 52.247 6.97e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5991 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5991 - - vun:114168194 889.412