Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5955 ATGAATAGCAGAATGAAGAACTTAATATGGGTGAGGTTAGTGACAATTTTTCTTGTTTTATTTGGCAGAGTATCTAATATTGCAATTGTAGCAAATGCCAATGCAGTATTTCCTGCCGTGTTTGCATTTGGTGACTCAATCTTTGATACCGGAAATAATAACAATCTTGCAACTGCTTCTAAGTGTAATTTTCCTCCCTATGGAAGGGATTTCTATGGAGGAGCTGCCACCGGTAGATTCGGTAACGGCAAAGTTCTATCAGATGTGATAACGGCGGCTATGGGAGTGAAAGACACGTTACCAGCCTATCTAAACCCACAATTAACGTCTAAAGACCTTCCTACCGGAGTATGCTTTGCATCAGGCGGTTCAGGATTAGACGATTTGACAGCAAACGCGCAGGGCGGAGTTTTAACCATGGGAGCTCAACTGAATCTGTTCAAACAATACATAGAAAAACTGAGAGCAGCAGTTGGAACACATAAATCATCAAAGATCATATCGAAGGCGTTGTTTATAATATCAGCAGGAAACAACGATGTTGCATTCGCTTATTCTTTTACTATTAGAAGAACTTTGGTTTTCAATGTATATGCGGATATGTTAGTTGAATCAAGTCAAAATTTCCTAAAGAGTCTATATCAACTGGGAGCACGACATGTGTGGGTTCTAAGTACAATACCATTGGGCTGTTTACCTGCAGCTAGGTCTACATTCGGGGGACCATTAAGGGCATGTGTAGATTTTGAGAATGTATTGGCACAAACATTCAATGGCATGTTATCGTCTTCGGTTTCCAGCCTCAAGGCCTCTCTTCCAGATTATGATGTTAAGTTTGTTGATGTTTATACTCCAATGCTTGATATCATAACGAATCCTTCTGCATCAGGGTTCCAAAATGTGATGAATGGATGTTGTGGAAGTGGAACATTTGAAATGGGAACATTTTGCAACAGGTTCACTTTCCAATGTCCAAATACTGCAGCCTACTTTTTCTGGGATGTTGCTCATCCTTCAGAGAGAGCTTATCAACTCACTGTTGCTAAACTATTACATGCTCAAAACTATGATCTCACTGGTCACCATGTTGCCAAAGCTCTTCATCCTTTGAATGTATCAAATATTAATTTTAATAACTAA 1140 0.3947 MNSRMKNLIWVRLVTIFLVLFGRVSNIAIVANANAVFPAVFAFGDSIFDTGNNNNLATASKCNFPPYGRDFYGGAATGRFGNGKVLSDVITAAMGVKDTLPAYLNPQLTSKDLPTGVCFASGGSGLDDLTANAQGGVLTMGAQLNLFKQYIEKLRAAVGTHKSSKIISKALFIISAGNNDVAFAYSFTIRRTLVFNVYADMLVESSQNFLKSLYQLGARHVWVLSTIPLGCLPAARSTFGGPLRACVDFENVLAQTFNGMLSSSVSSLKASLPDYDVKFVDVYTPMLDIITNPSASGFQNVMNGCCGSGTFEMGTFCNRFTFQCPNTAAYFFWDVAHPSERAYQLTVAKLLHAQNYDLTGHHVAKALHPLNVSNINFNN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5955 379 PANTHER GDSL ESTERASE/LIPASE EXL3 5 357 - -
Psa5g5955 379 CDD SGNH_plant_lipase_like 38 353 IPR035669 -
Psa5g5955 379 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 357 - -
Psa5g5955 379 SUPERFAMILY SGNH hydrolase 40 350 - -
Psa5g5955 379 Pfam GDSL-like Lipase/Acylhydrolase 40 346 IPR001087 GO:0016788
Psa5g5955 379 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Psa5g5955 379 Gene3D SGNH hydrolase 27 356 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5955 Psa-Chr5 513504403 513505983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5955 14 352 Pollen Coat Proteome AT1G75910 42.899 3.26e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5955 - - mtr:MTR_1g025910 553.518