Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5916 ATGGATCTACAACAAATAGATCAAGAGGTTTCATTGCAAGAAGACCAAGAAGAAACTCCATTTTCGCAATTAAGCAAACAAAACTCAATACTCTCACTTACCCTTGATGAGTTCCAGTGCAAGAGTGGAAAGAGCTTTGGTTCCCTCAACATGGAAGAATTCCTAGCCAGCATTTGGAGTTCCAGTGATGAAGCTACTCAATCAAACAAGAATACTAAAACTGTTGCAACTGAAGAAGAACAAAACATTTCCCAACATGGTAACTCATTTTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATTCATAAAAAGCAACCACAATTCAAAGAAGAAAATAAGCTTAACCGAAACGAGACACTCAAGAAGCAGCAAACACTTGGAGAAATGACTTTGGAGGATTTCTTTGTAAAAGCTGGTGTAGTACAACAACAATCATCATCCTTGTCATTTCAGAATCATAGTGGCGGTGTTGTTTCAAGTCATATGAGACCGTTGAATGTTGCAAGTTACGGTTTGAGGCCTTCTATTGGAATGGGATTTTCTAGCAATGGTCTTGTAACATACCAAATGTTGTCACAGAATAACAACTCAGGATTGCAGGACCGCGCAATCGGGAAATGTCAAAACTTGCCTGAGTCAAGTGGATGTAATACCAACAAGAGGATAATCGATGGTCCTCCCGAAGTTGTAGTGGAGCGAAGGCAACGTAGAATGTTGAAAAATCGAGAATCGGCCGCTCGTTCTCGAGCAAGAAGACAGGCATATACTGTGGAGCTAGAGGCAGAACTTAATCTGCTAAAAGAAGAGAATGAAAAGCTAAAACAAATTCTGGCTGAAGCAGAGAGCAAGAGGAAACAAGAGCTTTTACAGAGAAAGAATTCAACAAAGGTTCAAAAGGGAACAGAAAAATTAAGAGGAATAAGAAGGCCTATAAGTGCAACCTGGTGA 969 0.4014 MDLQQIDQEVSLQEDQEETPFSQLSKQNSILSLTLDEFQCKSGKSFGSLNMEEFLASIWSSSDEATQSNKNTKTVATEEEQNISQHGNSFSVPPPICKKTVDEVWSEIHKKQPQFKEENKLNRNETLKKQQTLGEMTLEDFFVKAGVVQQQSSSLSFQNHSGGVVSSHMRPLNVASYGLRPSIGMGFSSNGLVTYQMLSQNNNSGLQDRAIGKCQNLPESSGCNTNKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQILAEAESKRKQELLQRKNSTKVQKGTEKLRGIRRPISATW* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5916 322 MobiDBLite consensus disorder prediction 1 24 - -
Psa5g5916 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Psa5g5916 322 SMART brlzneu 236 302 IPR004827 GO:0003700|GO:0006355
Psa5g5916 322 PANTHER BZIP TRANSCRIPTION FACTOR 2 322 - -
Psa5g5916 322 Coils Coil 259 297 - -
Psa5g5916 322 SUPERFAMILY Leucine zipper domain 240 288 IPR046347 GO:0003700|GO:0006355
Psa5g5916 322 Pfam bZIP transcription factor 240 293 IPR004827 GO:0003700|GO:0006355
Psa5g5916 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 290 IPR004827 GO:0003700|GO:0006355
Psa5g5916 322 Gene3D - 238 299 - -
Psa5g5916 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 322 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5916 Psa-Chr5 511250246 511252030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5916 17 322 bZIP Transcription Factor Family AT3G44460 45.317 7.80e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g5916 bZIP_1 3.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5916 K14432 - gmx:100799576 323.553