Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5914 ATGACATTGACATTGTTCACTAACATGAACCGCATTGAGACACTTCTCAATGCACACAACACCAATACCAAACACAAGAAAAGATGGCATGATGCTTTCATTACTATCTATTGTTCTAGAGCTTTCAACTCGCCTTTCACCAACAAACCTAAAATCACACCAATACCATCTTTCACTGTCGTTGATTTTGACTCACCACACTCTTTTACCATTGATCAACAAACTCTCGTTGATCTTGTCAAAGACAAAAACATTGAAACCCTTCGTAGACATGTTGGAGGACTTGAAGGTGTTGCTTCATCTCTTCAAACCAACACTGAGTTTGGTATCAATAATGATTTTGAAGACATTGCACTCAGAAAACAAGTGTTTGGTTCCAACACATACAATAAGCCACCTTCTAAAACTTTCATTCACTTTGTTCTTGAAGCATTTAAGGATGTCACAATACTAATCCTTTTGGTTTGTGCCTCTCTTTCACTTGCCTTTGGCATCAAAGAACATGGAATCAAGGAAGGTTGGTATGATGGTGGAAGCATTTTTCTAGCGGTTTTCATTGTTATTTCAATGTCATCCATAAGTAACTTCAAACAAAACAAACAGTTTGATAAATTGTCTCAAGTTAGCAATGATATTCAAATTGATTTGGTTCGAAGTGGTCGCAGACAAAAGGTGTCCATCTTTGAGATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCGGCTGATGGATTGTTCGTAGATGGACATTCACTCAGAGTTGATGAATCCAGCATGACCGGTGAGAGCGATCATGTAGAGATTAGTAAACACCATCATCCTTTTTTGTTTTCCGGAACAAAAGTTGCTGACGGATATGCAAAAATGCTAGTTACATCGGTCGGTATGAACACAACATGGGGACAAATGATGAGTTCTATAAGCAATGACATTGATGAAGAAACACCTTTGCAGGCAAGGTTGAATAAGCTAACAACATCGATCGGAAAAGGTGGTTTGGCTGTGGCGTTTTTAGTCCTTATTGTATTGCTGATTCGATATTTCACCGGGAACACAGAGACTGATAACGGAGTTCGTGAATTCAATGGAAGAAAGACTAGTTTTGATGAAGTGATGAATGCAGTGATTGGAATTATTTCCGATGCTGTTACTATTGTTGTCGTTGCTATCCCGGAGGGTTTGCCATTAGCTGTGACTTTGACTCTTGCTTATTCTATGAAGAAAATGATGGCGGATCAAGCTATGGTCAGAAAACTTTCTGCATGTGAGACTATGGGATCTGCTACTACTATTTGCACCGATAAAACAGGTACACTCACTTTGAATCAGATGAAGGTGACAAAATTTTGGCTTGGTTTAGAACCATTGGAAGATGGTGCATATTTAGATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTCATAATACAACCGGTGGTGTTCATGAATCTAAATCAGACTCTGATTCAAATTTTGAGTTTTCTGGTAGTCCAACAGAAAAGGCAATATTATCTTGGGCTACTTTGGAATTGAATATGGAGATGGAAACTTTGACAAAAAGTTGTTCTATTCTTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGGAGAAATGTTGACAACAAAATCAATGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACTATGATGCTTATGGTGTTGTGAAGTATCTTGACAATGAAACCATGTCAAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTCGCATATGCTGAAGTTGAAGTTCAGGAGCTAGGAGATGAAGGAGCAAACAGCGAAATAGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGTATTAAGGATCCGTGTCGTCCTGGGGTGAAGACGGCAGTGGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGGATTCTTCAGGCTAATCAAGACACAGATGAAACCGTGGTTGAAGGCGAGCAATTTCGCAACTTCACGCATGAAGAAAGGTTAGAGAAAGTTGAAAAAATCTGCGTGATGGCAAGATCTTCTCCATTTGACAAACTTCTAATGGTTCAATGCTTAAAAGAAAAAGGGCATGTAGTTGCTGTAACAGGAGACGGTACAAATGATGCACCGGCATTGAAAGAAGCTGACATTGGACTTTCAATGGGAATTCAAGGTACAGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTCGCATCTATAGTAACAGTTTTGAATTGGGGAAGATGTGTTTACAACAACATCCAAAAATTCATTCAATTTCAATTAACAGTGAATGTAGCTGCACTTGTTATCAATTTTGTAGCAGCAGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAATTATTATGGGTCAATTTGATTATGGATACATTAGGTGCTTTGGCTCTTGCAACAGAAAAACCTACAAAGGAATTAATGGATCAAAAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTCTGTCACAAGCAATCTACCAAATAGTAATTTTGTTGACTCTACAATTTAAAGGTGAAACTATTTTTGGTGTGACATCAAAGGTAAATGACACATTGATTTTTAATACATTTGTTCTCTGTCAAGTGTTTAATGAGTTCAATGCAAGGAAGTTGGAGAAGAAGAACGTTTTTGAAGGAATATTTAGAAGCAAATTGTTTATGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTAGTGATGGTTGAGTTTTTGAAGAAATTTGCTGATACAGAAAGGTTGAATTGGAGAGAATGGATAATTTGTATTGGTCTTGCTTCTGCTTCTTGGCCAATTGGTTTTGTTGTGAAGTTGATACCAGTTTCAGATAAACCATTACTTGATTTTCTGAGTTTGAAGAAGAGATTATGA 3054 0.3749 MTLTLFTNMNRIETLLNAHNTNTKHKKRWHDAFITIYCSRAFNSPFTNKPKITPIPSFTVVDFDSPHSFTIDQQTLVDLVKDKNIETLRRHVGGLEGVASSLQTNTEFGINNDFEDIALRKQVFGSNTYNKPPSKTFIHFVLEAFKDVTILILLVCASLSLAFGIKEHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFEIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEISKHHHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQARLNKLTTSIGKGGLAVAFLVLIVLLIRYFTGNTETDNGVREFNGRKTSFDEVMNAVIGIISDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEDGAYLDVDPFVLQLIKEGVAHNTTGGVHESKSDSDSNFEFSGSPTEKAILSWATLELNMEMETLTKSCSILQVETFNSKKKRSGVLLRRNVDNKINAHWKGAAEMVLRMCSKYYDAYGVVKYLDNETMSKFESIIQGMAASSLRCIAFAYAEVEVQELGDEGANSEIVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILQANQDTDETVVEGEQFRNFTHEERLEKVEKICVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDQKPVGRTKPLITNIMWRNLLSQAIYQIVILLTLQFKGETIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFRSKLFMGIVGVTLVLQVVMVEFLKKFADTERLNWREWIICIGLASASWPIGFVVKLIPVSDKPLLDFLSLKKRL* 1018
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5914 1017 CDD P-type_ATPase_Ca_PMCA-like 117 878 - -
Psa5g5914 1017 SFLD Haloacid Dehalogenase 418 798 - -
Psa5g5914 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 443 643 IPR023299 GO:0000166
Psa5g5914 1017 SUPERFAMILY Calcium ATPase, transduction domain A 214 310 IPR008250 -
Psa5g5914 1017 Gene3D - 433 790 IPR023214 -
Psa5g5914 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 826 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g5914 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 379 456 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g5914 1017 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 79 1002 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Psa5g5914 1017 Gene3D - 143 993 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 259 273 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 639 650 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 661 671 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 745 764 - -
Psa5g5914 1017 PRINTS P-type cation-transporting ATPase superfamily signature 769 781 - -
Psa5g5914 1017 PRINTS H+-transporting ATPase (proton pump) signature 592 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g5914 1017 PRINTS H+-transporting ATPase (proton pump) signature 745 761 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g5914 1017 PRINTS H+-transporting ATPase (proton pump) signature 777 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g5914 1017 Pfam haloacid dehalogenase-like hydrolase 433 759 - -
Psa5g5914 1017 SFLD p-type atpase 418 798 IPR044492 -
Psa5g5914 1017 Pfam Cation transporting ATPase, C-terminus 830 1000 IPR006068 -
Psa5g5914 1017 Gene3D - 446 646 IPR023299 GO:0000166
Psa5g5914 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Psa5g5914 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 1002 IPR023298 -
Psa5g5914 1017 PANTHER CALCIUM-TRANSPORTING ATPASE 11 989 - -
Psa5g5914 1017 SMART Cation_ATPase_N_a_2 89 165 IPR004014 -
Psa5g5914 1017 Pfam Cation transporter/ATPase, N-terminus 92 160 IPR004014 -
Psa5g5914 1017 PANTHER CATION TRANSPORTING ATPASE 11 989 - -
Psa5g5914 1017 SUPERFAMILY HAD-like 434 850 IPR036412 -
Psa5g5914 1017 Gene3D - 116 312 - -
Psa5g5914 1017 Pfam E1-E2 ATPase 213 414 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa5g5914 Psa-Chr5 510858007 510862040 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5914 12 1016 Primary Pumps ATPases AT3G22910 66.929 0.0 1285
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5914 K01537 - gmx:100793918 1608.19