Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5892 ATGGACCCATGGCTCGACGATCTAACCGACGACCTCCAAAGCCTCAGCTTCGCCTCCACAACCACCACAACCGCCACCACCGCCGACATCAAACGCAGCACAAGCTTCAGTTCCGAAACAACCGCCTCAACTTCCACAAGATCCCTACCTCCAACAACCAAACCGCACGCTCCTTCCTCCGACCCTCGCTGGTCCGCCATTCACCGGATCCGATCAGAGTCACCTTCTCGTCGCATACTTCCGTCTGACCTTCGATTCTCCCGCCGTCTCGGCTCCGGCGATATTAGTTCCGTTTATCTTGCGGAACTTAACGATGATGGAAAAATCCCGGCGATGTTCGCGGCGAAAGTGATGGATAAGAAGGAGCTTATTAGTAGGAGTAAGGAAGGAAGAGCAAAGACGGAGAGAGAAATACTTGAGTCTCTTGACCATCCTTTTTTGCCTACTCTTTATGCTACCATCGACGCGGCGAAATGGCTTTGTCTCTTGACGGAGTTTTGTCCCGGCGGCGATCTTCACGTTCTCCGACAACGACAGCAGAACAAACGCTTCACTGAATCCGCCGTGAGATTCTATGCATCAGAAGTGTTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTATACCGTGATCTCAAACCAGAGAACGTGTTAGTTAGATCAGATGGCCATATCATGCTCACAGACTTTGACCTCTCCTTAAAATGTGATGACAATTCCACACCAACAGCCCAGATAATAATCTCCAGTCAAGACTCTCCACAAGTAGCCCCACAAAAAAATCCCCACTCCGAACCCTCCCAATTCGCCTCATCTTCTTGCATAATACCCAACTGTATAGTCCCAGCAGTGTCCTGTTTCCAACCAAAACGCAAGCGAAAGAAGAAACAAACTCAGCTTCACGGCCCGGAGTTTGTTGCTGAACCTATTGATGTCCGGTCCATGTCATTTGTGGGCACCCACGAATACTTGGCTCCTGAAATAGTGTCTGGGGAGGGGCACGGTAGTGCTGTGGATTGGTGGACCTTAGGGATATTTATATTCGAATTGTTTTACGGCGTGACGCCTTTTCGAGGCTTGGATAATGAACTCACTCTAGCAAATATCGTGGCTCGAGCTTTGGAGTTCCCAAAGGAACCCACCGTGCCAGCCACGGCAAAAGATCTTATCTCACAGTTATTGATTAAGGACCCAGCAAGGAGGTTGGGATCAATAATGGGAGCTTCTACAATCAAACACCACTCATTTTTCCAAGGTGTGAATTGGGCATTGTTAAGGTGTACACCTCCACCTTACGTTCCACCACCCTATACTAAAGATAAAGAAGATGTATCTGATGAAAGTTGTCCACAAACACCTGTTGATTATTATTGA 1377 0.4829 MDPWLDDLTDDLQSLSFASTTTTTATTADIKRSTSFSSETTASTSTRSLPPTTKPHAPSSDPRWSAIHRIRSESPSRRILPSDLRFSRRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELISRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQQNKRFTESAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDNSTPTAQIIISSQDSPQVAPQKNPHSEPSQFASSSCIIPNCIVPAVSCFQPKRKRKKKQTQLHGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLIKDPARRLGSIMGASTIKHHSFFQGVNWALLRCTPPPYVPPPYTKDKEDVSDESCPQTPVDYY* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5892 458 MobiDBLite consensus disorder prediction 20 54 - -
Psa5g5892 458 MobiDBLite consensus disorder prediction 437 458 - -
Psa5g5892 458 SMART serkin_6 84 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5892 458 PANTHER OS11G0150700 PROTEIN 1 458 - -
Psa5g5892 458 PANTHER FLIPPASE KINASE 1-RELATED 1 458 - -
Psa5g5892 458 Gene3D Transferase(Phosphotransferase) domain 1 314 436 - -
Psa5g5892 458 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 458 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa5g5892 458 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5892 458 Pfam Protein kinase domain 87 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5892 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Psa5g5892 458 Gene3D Transferase(Phosphotransferase) domain 1 171 242 - -
Psa5g5892 458 MobiDBLite consensus disorder prediction 20 65 - -
Psa5g5892 458 SUPERFAMILY Protein kinase-like (PK-like) 62 448 IPR011009 -
Psa5g5892 458 Gene3D Phosphorylase Kinase; domain 1 83 170 - -
Psa5g5892 458 ProSiteProfiles Protein kinase domain profile. 84 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5892 Psa-Chr5 508442891 508447124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5892 1 458 AGC Kinase Gene Family AT3G44610 64.894 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa5g5892 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5892 K08286 - gmx:100792738 721.465