Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5862 ATGAGGAATAAATCAATGGATGAAGATGAAGATGTAGTCTGTCTAGTCGCATCAAATGTTATCATCATCAATATCCTTTTGGAAGCCTCTCAACAAACTGATCTGACCATACTTTTTTCATTACAAATCACGATTACAGGCAAAGCTTCTTTAGCAACAACAAATGTGGGAAGAGGTCGTGGTACTGGTGCTATTGCTGTTAAGAAAACTTTATTAAAGCCTCTACATTGGGTGAAAGTTTCTCGAGCAGCACAAGGTAGTCTATGGGCTGATTCACAGAAACAAGGTAGTGATTCAAGGGGCCCTGAAATAGACATATCAGAACTTGAGACCTTGTTTTCAGCAGCATCTATTTCTTATGGAAATAGTACTAAAGGTGGACTTCGGCGTGGTTCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACCTACGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAGTCAAAATTCCTCTGCCAGATATGCTTAAAGCAATTTTGGCATTGGATTCTTGTGTTCTGGATATCGATCAGGTTGAGAACCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGGTGCTGAAGAACTATACCGGGATATGCTTGGAAAGTGTGAGCAGTTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGGTCAGGTGAGTGACTTAAGGAAAAATTTGAATACAATCAAAGATGCAACCAGAGAGGTCAAGGAATCTGTAAAACTTCGTCAAATAATGCAGACTATTCTTATGTTGGGCAATGCCTTGAATCAGGGAACAACCCGAGGATCAGCAGTAGGATTCAAATTGGACAGTCTTCTCAAGTTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAACTGATAGATTTTGACAAGGATCTTCTCAATATGGAAGCTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAGATGCAAGCTGTGCATAAAGGTTTAGAGAAGGTTGAGCAAGAACTCACGACTTCTGAAAATGATGGTTCTATATCTTCAGGATTTCACAAGGTGTTGAAGAGTTTTCTTGATTTTGCCGAAGCTGATGTGAAGTCACTTACAACATTGTATAACAGCAAACACAGTACCAATAACACACTTAACCCGTGTTCATAA 1236 0.3859 MRNKSMDEDEDVVCLVASNVIIINILLEASQQTDLTILFSLQITITGKASLATTNVGRGRGTGAIAVKKTLLKPLHWVKVSRAAQGSLWADSQKQGSDSRGPEIDISELETLFSAASISYGNSTKGGLRRGSNINKPEKVQLVDLRRAYNCEIMLSKVKIPLPDMLKAILALDSCVLDIDQVENLIKFCPTKEEMEVLKNYTGICLESVSSFFMELMKVPRVESKLRVFAFKITFSGQVSDLRKNLNTIKDATREVKESVKLRQIMQTILMLGNALNQGTTRGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLLNMEAASKIQLKALAEEMQAVHKGLEKVEQELTTSENDGSISSGFHKVLKSFLDFAEADVKSLTTLYNSKHSTNNTLNPCS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5862 411 Coils Coil 341 361 - -
Psa5g5862 411 PANTHER FORMIN-J 63 400 - -
Psa5g5862 411 Pfam Formin Homology 2 Domain 68 400 IPR015425 -
Psa5g5862 411 SUPERFAMILY Formin homology 2 domain (FH2 domain) 74 402 - -
Psa5g5862 411 Gene3D Formin, FH2 domain 64 407 IPR042201 -
Psa5g5862 411 ProSiteProfiles Formin homology-2 (FH2) domain profile. 62 411 IPR015425 -
Psa5g5862 411 SMART it6_source 62 409 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5862 Psa-Chr5 506757038 506759572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5862 56 398 FH2 protein (formin) Gene Family AT1G31810 73.487 9.29e-171 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5862 - - mtr:MTR_5g026645 607.831