Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5840 ATGAAGCATTCAACTTATTTCTTGACTTTTTCTGTTCTGGTTATAGTGTTCAATGTGGTTAAAGGACAACCTCTTGTCCCTGCATTGTTCATATTTGGTGATTCTGTTGTTGATGCAGGAAATAATAACAACTTGTACACATTTATTAAGTCAAATTTTCCTCCTTATGGAAGAGACTTCAAGAATCACATGCCAACAGGAAGGTTTTGTAATGGAAAACTTGCAACAGATTTTACAGCTGAAAATCTCGGATTTACAACTTATCCACCAGCTTACCTCAACTTACAGGTTAAAGGACAAAACCTCTTGAATGGTGCAAACTTTGCATCTGGTGCTTCTGGCTTCTATGGTCCTACAGCCAAACTATATCGCGCAATTCCATTGGACCAACAACTGGAACACTATAAAGAATGCCAGAATATATTGGTGGGAGTAACAGGACAATCAAATGCTTCAACGATTATATCTGATGCTATATATCTTGTTAGTGCTGGTAGCAGTGACTTTGTTCAAAACTATTACATAAATCCTTTACTTTACAAGGTTTACACTGCTGATCAATTCTCAGATATTGTTATGCAAGATTATATCGTTTTCATTCAGAATTTATATGCACTTGGAGCAAGGAAAATTGGTGTAACAACATTACCTCCATTGGGTTGTCTGCCGACCGCCATCACTCTCTTTGGCTCTCGTAGCAATGAGTGTGTGGAGAGGCTAAACACTGATGCTGTTAACTTCAACAATAAGCTAAACATCACATCTCAGAACTTGCAAATATCACTTAGTAACCTTACATTGGCTGTCCTTGATATCTACCAACCTCTCCATAACCTTGTCACTAAGCCTGCAGAAAATGGATTTTTCGAAGCAAGGAAGGCTTGTTGTGGATCTGGTTTGATAGAGACGTCTATATTGTGCAACAAGGACTCCATAGGAACATGTGCAAATGCTTCTGAATATGTGTTTTGGGACAGTTTTCATCCATCTGAGGCTGCAAACAAGGTTTTGGCTGATGGTTTGCTGCTTTCTGGCATCTCCCTCATATCCTAA 1053 0.3875 MKHSTYFLTFSVLVIVFNVVKGQPLVPALFIFGDSVVDAGNNNNLYTFIKSNFPPYGRDFKNHMPTGRFCNGKLATDFTAENLGFTTYPPAYLNLQVKGQNLLNGANFASGASGFYGPTAKLYRAIPLDQQLEHYKECQNILVGVTGQSNASTIISDAIYLVSAGSSDFVQNYYINPLLYKVYTADQFSDIVMQDYIVFIQNLYALGARKIGVTTLPPLGCLPTAITLFGSRSNECVERLNTDAVNFNNKLNITSQNLQISLSNLTLAVLDIYQPLHNLVTKPAENGFFEARKACCGSGLIETSILCNKDSIGTCANASEYVFWDSFHPSEAANKVLADGLLLSGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5840 350 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Psa5g5840 350 SUPERFAMILY SGNH hydrolase 29 340 - -
Psa5g5840 350 Gene3D SGNH hydrolase 17 344 IPR036514 -
Psa5g5840 350 PANTHER GDSL-MOTIF LIPASE 8 349 - -
Psa5g5840 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Psa5g5840 350 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Psa5g5840 350 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5840 Psa-Chr5 505392913 505394554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5840 24 341 Acyl Lipid Metabolism Gene Families AT4G10950 31.153 4.74e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5840 - - gmx:100792352 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5840 5 505392913 505394554 Psa5g5840 5 505392913 505394554 ECH
Psa5g5840 5 505392913 505394554 Psa7g3314 7 252187818 252189696 PCT