Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5838 ATGGCTTTAACTTTAACTTCAACTTCGACGCACCTTCGTTTTCAACCTTTACTCTCGCGCACCAACTACGTCATCTTCTCCGACCTTACCGAATTCCGTTCTCTTGAAACACGGAGTCATGATTCTCTCACTCTTCTTCGCCGGAGAAAGATCTCTGTTACGTCACCGTCGGCTCTGAAGCCGGTGAAATGCAGTAGATCCACGGAGGAGAAGCAGTGGAGCGAGGCGGAATCCGTCGCATCTGACGCCGATGAAGATTTGGATGATTCGAATGCTCCGGCTCTGAGGCAAACTCCTTCTATTGAGCCTCAGAGGATTGCAACTACCTCTTCCGGCGATTCTCCTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGACGGGGCAGTATCGACTAGAAAAATCAACAGGAGACAATTATTGAAGTCGAGTGGCCTTCGTCCCCGGGATGTCAGAAGTGTGGATCCATCACTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACCTGGGTTCGCTACGAGCAATAGCAATGCAAGATTGTGTGCTTATATTTGACTATAATCGTAAAGGTGGGCAAGCTTTTCTAGACACATTGCTGCCTAGGTTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAAATTGAGGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCGTTGCCAAATCGGATAACTGGAGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAGGGCAGGAGCTCTCCGACAGATGCTTCTTGACCTTCTGGAGGACCCAAATGAAATACGACGGATGTGTATTATGGGAAGAAACTGTACACTTAATAAAGGAAACAATAATGTGGAATGCTCAGTGCCCTTAGAAAAGCAGGTTGCTGATGAGGAGGAGGAGGAAATTGAAATGCTTCTGGAAAACTATCTCCAAAGATGTGAATCTTGTCATGGTCAATCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAGGATTCTATAGGTGTCAGTTTGAGCTCACGAAGACTTGAAGTTAGTAGAGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGCGCCCTTGTGGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACGTGTGTTTGCATTTTGGCTAACTACATCTGGGATCATTGTTGGTGGCATTATTGTTTTCTTTCTTATGTATAATTACCTCAGAGCAAGAAAAATATTTTGA 1362 0.4486 MALTLTSTSTHLRFQPLLSRTNYVIFSDLTEFRSLETRSHDSLTLLRRRKISVTSPSALKPVKCSRSTEEKQWSEAESVASDADEDLDDSNAPALRQTPSIEPQRIATTSSGDSPSLGIREPVYEVVEVKSDGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLDTLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRMCIMGRNCTLNKGNNNVECSVPLEKQVADEEEEEIEMLLENYLQRCESCHGQSERLLDSAREMEDSIGVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEERVFAFWLTTSGIIVGGIIVFFLMYNYLRARKIF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5838 453 Coils Coil 242 262 - -
Psa5g5838 453 MobiDBLite consensus disorder prediction 95 114 - -
Psa5g5838 453 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 42 452 IPR039204 -
Psa5g5838 453 Coils Coil 333 353 - -
Psa5g5838 453 Gene3D Magnesium transport protein CorA, transmembrane region 201 384 - -
Psa5g5838 453 MobiDBLite consensus disorder prediction 57 90 - -
Psa5g5838 453 CDD Mrs2_Mfm1p-like 126 452 IPR039204 -
Psa5g5838 453 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 42 452 - -
Psa5g5838 453 Gene3D - 119 200 - -
Psa5g5838 453 MobiDBLite consensus disorder prediction 64 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5838 117 453 MRS2 Gene Family AT5G22830 81.899 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5838 K16075 - gmx:100808371 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5838 5 505367395 505375214 Psa5g5838 5 505367395 505375214 ECH