Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5817 ATGGATATGATGTATGTTCCCTGGTTGGAAAAGTTGCTATCAATCACTACATTTTTCACAGTATGTGATGTCCACTCAAGCAAGGTGAAAAATGAGTGTAACATGTTTTGCATCGATTGCATTGACAATCCATATTGTGGATCTTGCATAACATCTCATCACAATGATCACCGTGTAATCCAAATAAGAAGATCATCTTATAATGAAGCAGTTAAGACCAGTGATATTTATAAACTCGTGGACATCCTTGGAATTCAAACCTACATGGTTAATAGTCGTGCAGTCGTATTCATAAACAAGAGAGAATTTGGTCAACTGAAGAGGAACAAAATTGGTTACATGAGTCACTCTCTTTGCAAGATATGCAAAAGAAGTCTCATAGACCCTACTTACTTTTGCTCATTGGCGTGTAAGTTTGAATCGATAAAAAAGGACGGTGGCTTTTTCATAAGCGCAAAAGATAGGGAGGAAATGAAAAGATTATTAGAGAAATCAATCAAGGAAACCCCACAAAATGAAAAGTCAAACAAATCAAGGAAACAATATCTGAAACGAAAATTAGAAGAAGCAGGAATTGACGAAGAACATGATAAAGGGGAGGAAGAGAAAGAATTAGAGGAAGAAAATAAAAAAGAGGTTGAAGAAGAAGATCACAACAAAGAAAGTGTGGTTCCGATCAATCCTCCATCGGCTTCAAAACGCAAGCCAAATTCAAGAAGAAAGGGAATACCTCACAGGGCACCCTTTTTTTAA 753 0.3652 MDMMYVPWLEKLLSITTFFTVCDVHSSKVKNECNMFCIDCIDNPYCGSCITSHHNDHRVIQIRRSSYNEAVKTSDIYKLVDILGIQTYMVNSRAVVFINKREFGQLKRNKIGYMSHSLCKICKRSLIDPTYFCSLACKFESIKKDGGFFISAKDREEMKRLLEKSIKETPQNEKSNKSRKQYLKRKLEEAGIDEEHDKGEEEKELEEENKKEVEEEDHNKESVVPINPPSASKRKPNSRRKGIPHRAPFF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5817 250 MobiDBLite consensus disorder prediction 165 222 - -
Psa5g5817 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 249 - -
Psa5g5817 250 Coils Coil 196 216 - -
Psa5g5817 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 249 - -
Psa5g5817 250 MobiDBLite consensus disorder prediction 165 250 - -
Psa5g5817 250 Pfam PLATZ transcription factor 63 138 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5817 Psa-Chr5 504116895 504118472 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa5g5817 PLATZ 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5817 - - cam:101499108 286.574