Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5815 ATGGATATGATGTTTGTTCCGTGGTTAGAAAAATTGCTATCCATTACTACATTTTTTACCGTATGTAAGATGCATCCTGACGAGCCAAAAAATGAGTGTAACATGTTTTGTCTCGAGTGCAATGACAATCCGTTTTGTGGTTCTTGCATAGCATCTGACCACAAAGATCATCATGTGATCCAAATACGGAGGTCGTCTTATAATGAGGCAATTAAGACCAGTGATATTTATAAGCTCGTTGACATCCTTGGAATACAAACATACATAATAAACAGTTTTACTGTAGTATTCATTAACAAGAGAGATCGTAGTCAACCCAAGAGGAACAATGTTGGTAAATTTGGTTATATGAGCGATTCTCTTTGCAAGATTTGCAAAAAAAGTCTAGTGGATCCTACTTACTTCTGCTCTTTGGCGTGTAAGTTTGCATCAATAAAAAAGGATGGAGGCTTTTCCGTAAGTGCCAAAGAGAAGAAAGAATTGGAAGCTTTGTTAGAAAAATCGATCAAGGCAACACTATCAAAAGAGAAGGCAAGCAAATCGAGCAAACAAAATCAAAAACGAAAACTAGATGAAGCAGGAGTTGCTGAAGAAAATGATCAAGAGAAAGAGGAAAAAGAAGAAGAAGATACAAAAAATGTTGGAGAAGATGACAACAACAAAGAAAGTGTGGTTCCGGCCAATCCTCCACCAATTTCAAAACGCAGGCCTAATTCAAGGAGAAAAGGAATACCTCATAGGGCACCCTTTTTTTAA 756 0.3704 MDMMFVPWLEKLLSITTFFTVCKMHPDEPKNECNMFCLECNDNPFCGSCIASDHKDHHVIQIRRSSYNEAIKTSDIYKLVDILGIQTYIINSFTVVFINKRDRSQPKRNNVGKFGYMSDSLCKICKKSLVDPTYFCSLACKFASIKKDGGFSVSAKEKKELEALLEKSIKATLSKEKASKSSKQNQKRKLDEAGVAEENDQEKEEKEEEDTKNVGEDDNNKESVVPANPPPISKRRPNSRRKGIPHRAPFF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5815 251 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 250 - -
Psa5g5815 251 MobiDBLite consensus disorder prediction 175 251 - -
Psa5g5815 251 MobiDBLite consensus disorder prediction 175 219 - -
Psa5g5815 251 Gene3D Classic Zinc Finger 17 79 - -
Psa5g5815 251 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 250 - -
Psa5g5815 251 SUPERFAMILY B-box zinc-binding domain 20 65 - -
Psa5g5815 251 Pfam PLATZ transcription factor 63 141 IPR006734 -
Psa5g5815 251 CDD Bbox2 21 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5815 Psa-Chr5 503940671 503942390 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa5g5815 PLATZ 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5815 - - cam:101499108 301.982