Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5807 ATGTTTTGCATCGATTGCATTGACAATCCATATTGTGGATCTTGCATAACATCTCATCACAATGATCACCGTGTAATCCAAATAAGAAGATCATCTTATAATGAAGCAATTAAGACCACTGATATTTATAAACTTCTGGACATCCTTGGAATTCAAACCTACATGGTTAATAGTTGTGCAGTCGTATTCATAAACAAGAGAGAATATGGTCAACTGAAGAGGAACAAAATTGGTTACATGAGTCACTCTCTTTGCAAGATATGCAAAAGAAGTCTCATAGATCCTACTTACTTTTGCTCATTGGCGTGTAAGTTTGAATCGATAAAAAAGGACGGTGGCTTTTTCATAAGCGCAAAAGATAGGGAGGAAATGAAAAGATTATTAGAGAAATCAATCAAGGAAACCCCACAAAATGAAAAGTCAAACAAATCAAGGGAACAATATCTGAAACGAAAATTAGAAGAAGCAGGAATTGACGAAGAACATGATAAAGAGGAGGAAGAGAAAGAATTAGAGGAAGAAAATAAAAAAGAGGTTGAAGAAGAAAATCACAACAAAGAAAGTGTGATTCCGATCAATCCTCCATCGGCTTCAAAACGCAAGCCAAATTCAAGAAGAAAGGGAATACCTCACAGGGCACCCTTTTTTTAA 651 0.3548 MFCIDCIDNPYCGSCITSHHNDHRVIQIRRSSYNEAIKTTDIYKLLDILGIQTYMVNSCAVVFINKREYGQLKRNKIGYMSHSLCKICKRSLIDPTYFCSLACKFESIKKDGGFFISAKDREEMKRLLEKSIKETPQNEKSNKSREQYLKRKLEEAGIDEEHDKEEEEKELEEENKKEVEEENHNKESVIPINPPSASKRKPNSRRKGIPHRAPFF* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5807 216 MobiDBLite consensus disorder prediction 130 216 - -
Psa5g5807 216 Pfam PLATZ transcription factor 29 104 IPR006734 -
Psa5g5807 216 MobiDBLite consensus disorder prediction 160 175 - -
Psa5g5807 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 215 - -
Psa5g5807 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 215 - -
Psa5g5807 216 Coils Coil 150 189 - -
Psa5g5807 216 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5807 Psa-Chr5 503718796 503719978 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa5g5807 PLATZ 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5807 - - cam:101499108 228.794