Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5801 ATGGTGGAAGATGAAGATTATAGAAGGAAAGCCAAGATTGCACTTGTTGCTATTGTGCTACTTGCCTCCCTCGCTGTTTTTGCTTCTTTTGTTGCTTTTGCTTATTATTGCTACATCCGTAACCAAGTTTCCAAGCGCCGACGCAATAGTCATAAAGTTGAAGATGCTGCTAACCTTAATGAGAAAAGTGATTTTTCAAATCTGCAAGTTGTTGCTGAGGAAGGACTTAAGGTGTTCACTTTCAAGCAGCTGCATTCTGCTACTGGAGGCTTCAGCAAGTCAAATGTGGTTGGTCATGGTGGATTTGGACTAGTTTACCGTGGAGTGCTCAACGATGGAAGGAAGGTTGGGATTAAGTTGATGGATCAAGCAGGAAAGCAAGGAGAAGAAGAGTTTAAAGTCGAGGTGGAATTGCTAAGCCGGTTGCATTCGCCATATTTGCTTGCATTGCTTGGATACTGTTCTGATCATAATCATAAGCTGTTGGTGTATGAATTTATGGCGAATGGTGGCTTGCAAGAACATCTTTATCCTGTCAGCAATAACAATTCGAGTGTCACGTCTGTTAATTTAGATTGGGAAACTCGATTGAGAATAGCACTTGAAGCTGCCAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCTCCTGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGACAAAAAATTTCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGTCGGTGGACATGTTTCAACTCGCGTTTTAGGCACCCAAGGATATGTTGCCCCCGAATATGCACTAACAGGTCATTTAACAACAAAATCAGATGTGTACAGTTATGGTGTCGTACTTTTGGAGCTTCTTACCGGCCGAGTGCCTGTTGATATGAAGAGACCTCCTGGAGAAGGCGTACTCGTTAGTTGGGCTTTGCCCCTTTTGACTGATAGAGAAAAAGTTGTAAAGATTATGGATCCAGCATTGGAGGGACAGTACTCAATGAAAGATGTTATCCAAGTAGCAGCGATTGCGACAATGTGTGTGCAACCAGAAGCAGATTACAGACCTCTCATGGCGGATGTAGTGCAGTCTTTGGTTCCATTGGTGAAGACTCACCGATCCAACTCAAAAGTAGGCAGCTGCTCTAGTTTCAATTCACCCAAGTTGTCACCTGGCCCTGCCCAACAACCAGATAATGCAAATATGTAA 1221 0.43 MVEDEDYRRKAKIALVAIVLLASLAVFASFVAFAYYCYIRNQVSKRRRNSHKVEDAANLNEKSDFSNLQVVAEEGLKVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLNDGRKVGIKLMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDHNHKLLVYEFMANGGLQEHLYPVSNNNSSVTSVNLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPALEGQYSMKDVIQVAAIATMCVQPEADYRPLMADVVQSLVPLVKTHRSNSKVGSCSSFNSPKLSPGPAQQPDNANM* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5801 406 PANTHER OS07G0227300 PROTEIN 4 395 - -
Psa5g5801 406 SUPERFAMILY Protein kinase-like (PK-like) 74 369 IPR011009 -
Psa5g5801 406 ProSiteProfiles Protein kinase domain profile. 91 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5801 406 CDD STKc_IRAK 97 372 - -
Psa5g5801 406 MobiDBLite consensus disorder prediction 381 406 - -
Psa5g5801 406 Pfam Protein tyrosine and serine/threonine kinase 94 369 IPR001245 GO:0004672|GO:0006468
Psa5g5801 406 Gene3D Transferase(Phosphotransferase) domain 1 167 388 - -
Psa5g5801 406 Gene3D Phosphorylase Kinase; domain 1 50 166 - -
Psa5g5801 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Psa5g5801 406 PANTHER OS01G0750732 PROTEIN 4 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5801 Psa-Chr5 503010931 503013875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5801 1 395 Receptor kinase-like Gene Family AT3G58690 77.215 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa5g5801 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5801 - - gsj:114372917 668.307