Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5794 ATGTCTGAATTAGACGCACAAATTCCTACTACCTTTGATCCTTTTGCTGAGGCAAATGCTGAGGACGCCGGTGCTGGCTCATCAAAGGAGTACGTGCATATTCGTATACAGCAGCGAAATGGTAGAAAAAGCTTGACAACTGTCCAGGGATTGAAGAAAGAATTCAGTTACAACAAGATTCTTAAAGACCTTAAGAAGGAGTTTTGCTGTAATGGTACAGTTGTCCAGGACCCAGAGCAAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACCTTCCTAGTCCAGGCTGGAATTGTGAAGAAGGAGCATATTAAAATTCATGGTTTCTAA 345 0.4174 MSELDAQIPTTFDPFAEANAEDAGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPEQGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5794 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Psa5g5794 114 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 114 IPR005874 GO:0003743
Psa5g5794 114 PIRSF Transl_init_SUI1_Euk 1 114 IPR005874 GO:0003743
Psa5g5794 114 MobiDBLite consensus disorder prediction 1 26 - -
Psa5g5794 114 Gene3D - 1 114 - -
Psa5g5794 114 SUPERFAMILY eIF1-like 4 114 IPR036877 GO:0003743|GO:0006413
Psa5g5794 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Psa5g5794 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 114 - -
Psa5g5794 114 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 1 114 - -
Psa5g5794 114 Pfam Translation initiation factor SUI1 29 103 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5794 Psa-Chr5 502689636 502691401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5794 1 114 Eukaryotic Initiation Factors Gene Family AT4G27130 86.842 3.85e-72 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5794 K03113 - csin:114321350 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5794 5 502689636 502691401 Psa5g5794 5 502689636 502691401 ECH