Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5778 ATGATAGCACAAACGGGAACGAACAAAGTTAAAGCCATAATTCTAAACAAAAAAGGGCATAATTCTGAATATCGTCGGTTGAGGGCTGATGGATTATCAATAATGCAGGGACTTCAAATTCTTATATTATATCATAATGATTTTTCAGGAAGTCTCAAATTTCTTTCTAACAGCTTGCAGTATCTTGAGTGGCATGGTTACCCCTTTGCTTCTTTGCCATTAAATTTTGAGCCGTATGTGCTTGTTGAATTGAACATGCCTTGTAGCAGCATCCAACGACTATGGAACGATCACAAGGATCTCCCCTGTTTGAAAAGGGTGGATCTCAGCAACTCGAAATGTCTTGTGGAGACACCAAATTTTTCTGGAAGCAAAATACTTGAGCGACTTGATCTTACAGGATGCATAAACCTATCGTATGTCCATCCATCTATTGGACTTCTGGAAAAACTTGTTTTCTTGAGTTTTGAAGGCTGCAGGAGCTTGGTCAGGATAGTTCTTCACGGTGACACTGCATCTAAGTTATGCTCTCTCAAAGTTCTGCACCTCTCTGGCTGCACAAA 563 0.4014 MIAQTGTNKVKAIILNKKGHNSEYRRLRADGLSIMQGLQILILYHNDFSGSLKFLSNSLQYLEWHGYPFASLPLNFEPYVLVELNMPCSSIQRLWNDHKDLPCLKRVDLSNSKCLVETPNFSGSKILERLDLTGCINLSYVHPSIGLLEKLVFLSFEGCRSLVRIVLHGDTASKLCSLKVLHLSGCT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5778 187 Gene3D Ribonuclease Inhibitor 18 187 IPR032675 -
Psa5g5778 187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 186 IPR044974 GO:0006952
Psa5g5778 187 SUPERFAMILY L domain-like 28 186 - -
Psa5g5778 187 Pfam Leucine Rich Repeat 81 95 IPR011713 -
Psa5g5778 187 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5778 Psa-Chr5 501907288 501908176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5778 48 187 WRKY Transcription Factor Family AT4G12020 41.216 5.26e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5778 - - mtr:MTR_2g083520 291.967