Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5771 ATGGCTGAAGGATTTTCAAATATGACCAACCTTGTACTTCTCATGTTGTATCATAACAACTTTTCAGGCAATTTGGACTTTCTTTCAAACAACTTGCGATATCTTTTGTGGCATGGATACCCTTTTACTTCTTTGCCGCCACGTTTTGAGCCAGATTGTCTTGTGGAATTAAATATGCCTGATAGTAGCATTCAACGACTGTGGGAAGGTTGCAAGGAACTACCTAATTTGAAAAGGATGGATTTGAGCAACTCCAAGTATCTTATAGAGACTCCAAAGATTTTTAGGACCCCAAAAATTGAGCGGCTAGATTTTACAGGATGCACAAACTTAATGCAGGTCCATCCATCAATTGGACATCTTACTGAACTTGTTTTCTTAAGTTTGCAAAACTGCAGCAGTTTGGTTGACCTTGATTTTGGTATTGCATCAAGATTAAGTTCTTTGAGAGTTCTACGTCTTTGTGGTTGTACAAAACTTGAAAAGACGCCAAGTTTTACCGGCGCATCAAACCTTGAGTACCTTGATATGGATGAATGTACAACTTTATCCAAAGTTCATGAATCCATTGGGGATATGACAAACCTTAAATTCTTGAGTTTGAGAAACTGCACAAATCTGGTTGAAATGCCCGATAGCATCAATAGGATGACATCCCTTGTAACTCTAGATTTTTGCGGTTGCTTGAGTCTTACAATTCTACCCCTGAAATGGACTCCTGCTTATCATATGAGATCTTTGATTTTTCTAGATTTAAGCTTTTGCAATCTTCATGAAGTACCTGATACTATTGGAACGTTAAAGACGTTGGAAAGACTAAACCTACAAGGAAACAAATTTCGTTCACTACCTGATGTTTTCTACATTCTTCCCAACATAGCATATGTAAACTTATCTCATTGCCATGAGCTTGAAACTATTGAATTCCAACCTTTAATTAGTGCTTCTTTTGGAGGAATGTATTTTAATGGAGGAAGATATTTTGACATAGCAGCAGGATTGGGTGATCATAGATCTGGATTATATATATTTGACTGCCCCAAGATCATGAAGATGAGCATAAACCTAACGTTGGGATATAGATGGTTTCGAAAACTGCATGAGAATCCCCAAAACTTTCGGTGTGGCTTTGACATCGTTATTCCTTGGGATTGGAAAAATATTGATCATCCGTCAAGTGGCTGTATTCTAAAATGGTTCAATCACCAATTCGATGGCGGTTCAATAATAAGGATAGTGGATTTTGATGAGTTTTACAAGAATTTTGGCTTTGCCTTCTGTGTGTCGTTTGAGGTAAAAAATTGTCCTGCGAATTCTGGATCTCCACAGGATTCATTTTCTTCAGCACTCCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAGGAACGCTTCGATATGCCTCTCAGTTTGGAACTGCACAAAATTGATGGCTCCAAACATCTTTGGCTAATCTATATCTCTGAAGAGCACTGCCATTTCTTAAAAACTGGAGCCCATATCACATTTAAAGCCTGCCCAGGTTTGTTAATAAAGAAGTGGGGATTACGCTTTGTAATCAAGGATTTAATTGGATCATATCCTGACCCTAGCTTCTGGGAACACTTTCTGGACACTGATGCGCCCTCATCGGACACTGATGCGCCCCAACTTTTCATAGATTATGTACAAAAAACCAGCATGAAGTCTGGAACTAAAATCCAACTTCCTTACAATTGGTTGGTTACTGAACAGGAAGAAGTTGAGAAGTCTAGAGCCAAGTCAAAAGATACCGATCTTTCTAATCTGGGCCTTTAG 1803 0.3849 MAEGFSNMTNLVLLMLYHNNFSGNLDFLSNNLRYLLWHGYPFTSLPPRFEPDCLVELNMPDSSIQRLWEGCKELPNLKRMDLSNSKYLIETPKIFRTPKIERLDFTGCTNLMQVHPSIGHLTELVFLSLQNCSSLVDLDFGIASRLSSLRVLRLCGCTKLEKTPSFTGASNLEYLDMDECTTLSKVHESIGDMTNLKFLSLRNCTNLVEMPDSINRMTSLVTLDFCGCLSLTILPLKWTPAYHMRSLIFLDLSFCNLHEVPDTIGTLKTLERLNLQGNKFRSLPDVFYILPNIAYVNLSHCHELETIEFQPLISASFGGMYFNGGRYFDIAAGLGDHRSGLYIFDCPKIMKMSINLTLGYRWFRKLHENPQNFRCGFDIVIPWDWKNIDHPSSGCILKWFNHQFDGGSIIRIVDFDEFYKNFGFAFCVSFEVKNCPANSGSPQDSFSSALPHPFYLSFESEHTEERFDMPLSLELHKIDGSKHLWLIYISEEHCHFLKTGAHITFKACPGLLIKKWGLRFVIKDLIGSYPDPSFWEHFLDTDAPSSDTDAPQLFIDYVQKTSMKSGTKIQLPYNWLVTEQEEVEKSRAKSKDTDLSNLGL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5771 600 Gene3D Ribonuclease Inhibitor 167 237 IPR032675 -
Psa5g5771 600 Gene3D Ribonuclease Inhibitor 1 166 IPR032675 -
Psa5g5771 600 Pfam Leucine Rich Repeat 53 70 IPR011713 -
Psa5g5771 600 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 145 305 - -
Psa5g5771 600 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 62 262 - -
Psa5g5771 600 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 37 162 - -
Psa5g5771 600 ProSiteProfiles Leucine-rich repeat profile. 269 290 IPR001611 GO:0005515
Psa5g5771 600 SUPERFAMILY L domain-like 3 363 - -
Psa5g5771 600 Gene3D Ribonuclease Inhibitor 238 322 IPR032675 -
Psa5g5771 600 Pfam Leucine rich repeat 250 302 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5771 Psa-Chr5 501716243 501719906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5771 144 305 WRKY Transcription Factor Family AT4G12020 31.288 5.04e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5771 - - mtr:MTR_5g005550 603.594