Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5767 ATGTACAAACGCAGATTCAACACTAAACCATTGTATGTTAGTGACCCTGATGAGCCTGAGCCCGAGCCCGAGCCCATCTCGGAAACTGAGCCTGCTTCTCCTTCTTGTGAAGACGCAAAAATTGAAGAACCGTCGCCTAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCGATTGCTGACGTGGAAGGATCTAAGAGCAAAGGAGAGACGTGTCCACCGTCAGATTCATGGGCCTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCCCCTTATCCCAGGGGATATTACCGATGTAGCAGTTCAAAAGGGTGTCCCGCTAGGAAACAAGTTGAGAGAAGCCGCGTGGACCCCACAAAGCTTCTCGTAACCTACGCCCATGACCACAACCACTCTCTCCCTCTTCCCAAATCTCATTCTTCCTCTTCCACCGCCGTAACCGTCACCGTCGAATCTCCATCTCCATCTCCCGGCGATTCTTCCGGTGAATGCAACACTGCCTCTCCCGCCGCCACTCCACAGCAAGAGGATCTAACGGTTTTCGCCACTCATCCTGACTTTGACCTCTCCGGTGACTCGACTGTTCTGCTCAGCCACCACCACCACCACCATGCCGTGTTTGGCTGGTTCGACGACGTTGCATCTACCGGAGTTCTTGTAAGTCCGATCTGCGGAGGAGTGGAGGATATAACGCTGACGATGAGAGAAGAGGATGAATCGCTGTTTGCTGATCTCGGGGAGTTGCCGGAGTGTTCAACGGTTTTCCGGAAGAGGAATATTCCGAGCGCGATTCAGTGTAGCGGCATCACAGGATAA 825 0.5261 MYKRRFNTKPLYVSDPDEPEPEPEPISETEPASPSCEDAKIEEPSPKKRREMKKRVVTIPIADVEGSKSKGETCPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLLVTYAHDHNHSLPLPKSHSSSSTAVTVTVESPSPSPGDSSGECNTASPAATPQQEDLTVFATHPDFDLSGDSTVLLSHHHHHHAVFGWFDDVASTGVLVSPICGGVEDITLTMREEDESLFADLGELPECSTVFRKRNIPSAIQCSGITG* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5767 274 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5767 274 MobiDBLite consensus disorder prediction 138 176 - -
Psa5g5767 274 MobiDBLite consensus disorder prediction 35 54 - -
Psa5g5767 274 PANTHER OS01G0750100 PROTEIN 22 268 - -
Psa5g5767 274 MobiDBLite consensus disorder prediction 133 176 - -
Psa5g5767 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 268 IPR044810 GO:0003700
Psa5g5767 274 MobiDBLite consensus disorder prediction 1 54 - -
Psa5g5767 274 Gene3D WRKY domain 63 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5767 274 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g5767 274 SUPERFAMILY WRKY DNA-binding domain 73 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g5767 274 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5767 Psa-Chr5 501529258 501533237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5767 22 268 WRKY Transcription Factor Family AT3G58710 50.584 6.69e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g5767 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5767 - - cam:101504205 391.349