Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5760 ATGATCACTGCTATCAAAACTGAAGCAAGAATTGGTGCTTCTATACTTCGCTTGTTCTTCCATGACTGCTTTGTTAATGGATGTGATGGATCAATCTTATTGGATGACACTGCCACATGGATGGTTCCACTTGGAAGAAGAGATGCAAGAACAGCAAGCCAAAGTGCTGCCAACAGTCAAATCCCTGGACCATCATCTGACCTTGCAACCCTCACCACAATGTTTAGAAACAAAGGTCTAACATTAAATGACCTTACTGTCCTTTCTGGTGCACACACCATAGGCCAAACTGAGTGTCAATTTTTCAGAAATCGCATATACAATGAAACCAACATTGACAAAAACTTTGCTACCTTAAGAAAAACAAATTGTCCTTCCTCTGGTGGTGACACCAATTTGGCACCTCTAGATTCCGTCACTCCAACTACTTTTGACAACAACTACTATAATGACCTTATTGCTAATAAAGGACTTCTTCACTCTGATCAAGCTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAGGACTTATAGCAGAAATACTGTTGCTTTTAAAAGAGACTTTGCTGCTGCTATGATAAAGTTGAGTAGAATCAGTCCTCTCATTGGGACTAATGGGGAGATTAGAAAGAATTGCAGGCTTGTCAATTAA 657 0.3957 MITAIKTEARIGASILRLFFHDCFVNGCDGSILLDDTATWMVPLGRRDARTASQSAANSQIPGPSSDLATLTTMFRNKGLTLNDLTVLSGAHTIGQTECQFFRNRIYNETNIDKNFATLRKTNCPSSGGDTNLAPLDSVTPTTFDNNYYNDLIANKGLLHSDQALFNGVGSQVSLVRTYSRNTVAFKRDFAAAMIKLSRISPLIGTNGEIRKNCRLVN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5760 218 Gene3D - 39 218 - -
Psa5g5760 218 CDD secretory_peroxidase 4 217 IPR033905 GO:0004601|GO:0042744
Psa5g5760 218 ProSitePatterns Peroxidases proximal heme-ligand signature. 84 94 IPR019793 -
Psa5g5760 218 Gene3D Peroxidase, domain 2 62 197 - -
Psa5g5760 218 Pfam Peroxidase 39 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 Pfam Peroxidase 3 35 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 ProSitePatterns Peroxidases active site signature. 12 23 IPR019794 GO:0004601
Psa5g5760 218 Gene3D - 1 38 - -
Psa5g5760 218 ProSiteProfiles Plant heme peroxidase family profile. 1 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 SUPERFAMILY Heme-dependent peroxidases 3 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 PANTHER PEROXIDASE 39 218 - -
Psa5g5760 218 PANTHER PEROXIDASE 1 39 - -
Psa5g5760 218 PANTHER PEROXIDASE 72-RELATED 39 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 PANTHER PEROXIDASE 72-RELATED 1 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 PRINTS Haem peroxidase superfamily signature 12 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 PRINTS Haem peroxidase superfamily signature 84 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5760 218 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5760 Psa-Chr5 501053790 501055025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5760 3 218 Peroxidase AT5G05340 50.000 1.25e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5760 K00430 - gmx:100810392 285.419