LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g5759	ATGATAAGTGCTATCAAAACTGAAGCAAGAATTGGTGCTTCTATACTTCGTTTGTTCTTCCATGATTGCTTTGTGAATGGATGTGATGGATCAATCTTATTGGATGACACTGCGACGTTTACTGGGTTTGTCACGATGGCGGAAGAACCACAATACGCCCTAAAATGCAAATACGAAGACCAACCCACCGCCACTGACATTCAACTCGAAGTCGCAAACGCTAAACAGAAAGCCCAAGAAGCCGCCGCTCGGCTCCTCAGTGTCACCGGCGGCGCTCCTCCACTTTCCTTCGATCCTAAACGTTCCAAGTCCGATAATGGTGCTCCTCAATCTGGCTTCGATTCTTACAATTTGAAGCCGCAATATTCAGCTGGTTCTTATGGTGGTTATAGAGGTGAGACTATTAAGTATCTTCAGTTGCAGTCTGGGGCTAAGATTCAGGTTACTCGTGATATGGATGCGGATCCTAATTCTACTACGAGGATGGTTGAGCTTATGGGTACTTCTGATGCTGTAGGCTTCGCTGAGAAACTTCATCATGAATCTTGCTGA	552	0.4565	MISAIKTEARIGASILRLFFHDCFVNGCDGSILLDDTATFTGFVTMAEEPQYALKCKYEDQPTATDIQLEVANAKQKAQEAAARLLSVTGGAPPLSFDPKRSKSDNGAPQSGFDSYNLKPQYSAGSYGGYRGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTSDAVGFAEKLHHESC*	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g5759	183	ProSiteProfiles	Plant heme peroxidase family profile.	1	109	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5759	183	Pfam	KH domain	129	180	IPR004088	GO:0003723
	Psa5g5759	183	Gene3D	-	1	53	-	-
	Psa5g5759	183	SUPERFAMILY	Heme-dependent peroxidases	3	46	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5759	183	Coils	Coil	64	84	-	-
	Psa5g5759	183	MobiDBLite	consensus disorder prediction	96	115	-	-
	Psa5g5759	183	Gene3D	K Homology domain, type 1	120	179	IPR036612	GO:0003723
	Psa5g5759	183	PANTHER	KH DOMAIN CONTAINING RNA BINDING PROTEIN	129	181	-	-
	Psa5g5759	183	Pfam	Peroxidase	3	37	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5759	183	ProSitePatterns	Peroxidases active site signature.	12	23	IPR019794	GO:0004601
	Psa5g5759	183	SUPERFAMILY	Eukaryotic type KH-domain (KH-domain type I)	123	177	IPR036612	GO:0003723
	Psa5g5759	183	ProSiteProfiles	Type-1 KH domain profile.	120	179	-	-
	Psa5g5759	183	PANTHER	K DOMAIN-CONTAINING PROTEIN-RELATED	129	181	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g5759	Psa-Chr5	501042962	501045145	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g5759	3	42	Peroxidase	AT5G05340	85.000	3.81e-19	81.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g5759	K13210		-	gmx:100797476	128.642