Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5758 ATGGCTACCTGTATTAAATTATTTGTTACACTCTCTATTATTTCTCTCTTAGCATCTTCCACCAATGCACAACTTATTAATAACTTCTATGCTACAACTTGTCCTAGTCTTCAAACAATTGTTCGTAATACAATGATAAGTGCTATCAAAACTGAAGCAAGAATTGGTGCTTCTATACTTCGTTTGTTCTTCCATGATTGCTTTGTGAATCTTGGAGGACCCACATGGATGGTTCCACTTGGAAGAAGAGATGCAAGAACAGCAAGCCAAAGTGCTGCCAACAGTCAAATCCCTGGACCATCATCTGACCTTGCAACCCTTACCACGATGTTTAAAAACAAAGGTCTAACATTAAATGACCTTACTGTCCTTTCTGGTGCTCACACCATAGGCCAAACTGAGTGTCAATTTTTCAGAAATCGCATATACAATGAAACCAACATTGACACAAACTTTGCTACCTTAAGAAAATCAAATTGTCCTTCCTCTGGTGGTGACACCAATTTGGCACCACTAGATTCCGTCACTCCAACTACTTTTGACAACAACTACTATAATGACCTTATTGCTAATAAAGGACTTCTTCACTCTGATCAAGCTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAGGACTTATAGCAGAAATACTGTTGCTTTTAAAAGAGACTTTGCTGCTGCTATGATAAAGTTGAGTAGAATCAGTCCTCTCACTGGGACTAATGGGGAGATTAGAAAGAATTGCAGGCTTGTCAATTAA 765 0.383 MATCIKLFVTLSIISLLASSTNAQLINNFYATTCPSLQTIVRNTMISAIKTEARIGASILRLFFHDCFVNLGGPTWMVPLGRRDARTASQSAANSQIPGPSSDLATLTTMFKNKGLTLNDLTVLSGAHTIGQTECQFFRNRIYNETNIDTNFATLRKSNCPSSGGDTNLAPLDSVTPTTFDNNYYNDLIANKGLLHSDQALFNGVGSQVSLVRTYSRNTVAFKRDFAAAMIKLSRISPLTGTNGEIRKNCRLVN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5758 254 Pfam Peroxidase 70 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Psa5g5758 254 PANTHER PEROXIDASE 72-RELATED 70 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 PANTHER PEROXIDASE 72-RELATED 20 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Psa5g5758 254 Gene3D - 71 251 - -
Psa5g5758 254 Gene3D Peroxidase, domain 2 98 233 - -
Psa5g5758 254 CDD secretory_peroxidase 24 253 IPR033905 GO:0004601|GO:0042744
Psa5g5758 254 PANTHER PEROXIDASE 70 254 - -
Psa5g5758 254 PANTHER PEROXIDASE 20 70 - -
Psa5g5758 254 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 ProSiteProfiles Plant heme peroxidase family profile. 57 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5758 254 Gene3D - 25 70 - -
Psa5g5758 254 SUPERFAMILY Heme-dependent peroxidases 24 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5758 Psa-Chr5 501013112 501014953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5758 23 70 Peroxidase AT5G05340 64.583 2.16e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5758 K00430 - gmx:100810392 302.367