Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5749 ATGGCTACCTTTACTAAATCATGTGTGATACTCTCCATTATTTCTCTCTTTGCTTGTTGCACCAATGCACAACTTGTTAATAACTTCTATGCAACAACATGCCCTAGCCTTGAAACCACTGTACGCAATACAATGACCAGTGCTATCAAAAACGAATCCAGAATTGGTGCTTCTATTCTTCGCTTGTTTTTCCATGATTGCTTTGTTAATGGATGCGATGGATCAATCTTATTAGATGATACTGCGACGTTTACTGCCAAGGGTCTAACTGCAAATGACCTCACTGTTCTTTCTGGTGCACACACCATAGGCCAAGGAGAGTGTCGACTTTTCAGAACTCGCATATACAATGAAACCAATATTGACCCAAACTTTGCCACCTTAAGAAAAACAACTTGTCCTTTATCTGGTGGTGACACCAATTTGGCACCTCTTGATACTCTGTGA 447 0.4049 MATFTKSCVILSIISLFACCTNAQLVNNFYATTCPSLETTVRNTMTSAIKNESRIGASILRLFFHDCFVNGCDGSILLDDTATFTAKGLTANDLTVLSGAHTIGQGECRLFRTRIYNETNIDPNFATLRKTTCPLSGGDTNLAPLDTL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5749 148 PANTHER PEROXIDASE 72-RELATED 19 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 PANTHER PEROXIDASE 72-RELATED 83 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 Gene3D Peroxidase, domain 2 82 148 - -
Psa5g5749 148 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Psa5g5749 148 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Psa5g5749 148 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 ProSitePatterns Peroxidases proximal heme-ligand signature. 93 103 IPR019793 -
Psa5g5749 148 Pfam Peroxidase 82 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 Pfam Peroxidase 41 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 ProSiteProfiles Plant heme peroxidase family profile. 24 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 Gene3D - 28 81 - -
Psa5g5749 148 SUPERFAMILY Heme-dependent peroxidases 24 147 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g5749 148 PANTHER PEROXIDASE 19 86 - -
Psa5g5749 148 PANTHER PEROXIDASE 83 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5749 Psa-Chr5 499831768 499832666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5749 23 87 Peroxidase AT5G05340 67.692 4.89e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5749 K00430 - sspl:121793461 130.954