LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g5748	ATGACAACATTTACTAAATCATACGTGGCACTCTCTATTATTTCTCTTCTATCATGTTGCACCAATGCACAACTTGTTGATAACTTCTATGCAGCAACATGCCCTAGCCTCGAAACCACTGAACGCAATACAATGACCAGTGCTATCCAAAATGAATCCAGAATTGGTGCTGCTATACTTCGCATGTTTTTCCATGGTTGCTTTGTTAATGGATGTGATGGATCAATCTTATTGGATGACACTGCTATGTTTACGG	256	0.3945	MTTFTKSYVALSIISLLSCCTNAQLVDNFYAATCPSLETTERNTMTSAIQNESRIGAAILRMFFHGCFVNGCDGSILLDDTAMFT	85

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g5748	85	Gene3D	-	25	85	-	-
	Psa5g5748	85	ProSitePatterns	Peroxidases active site signature.	56	67	IPR019794	GO:0004601
	Psa5g5748	85	ProSiteProfiles	Plant heme peroxidase family profile.	24	85	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5748	85	PANTHER	PEROXIDASE 72-RELATED	10	85	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5748	85	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	19	-	-
	Psa5g5748	85	Pfam	Peroxidase	42	79	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5748	85	PANTHER	PEROXIDASE	10	85	-	-
	Psa5g5748	85	SUPERFAMILY	Heme-dependent peroxidases	24	84	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5748	85	PRINTS	Plant peroxidase signature	34	53	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g5748	85	PRINTS	Plant peroxidase signature	58	78	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g5748	Psa-Chr5	499625850	499626203	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g5748	23	85	Peroxidase	AT5G05340	61.905	7.88e-24	90.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g5748	K00430		-	gmx:100806309	112.079

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