Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5748 ATGACAACATTTACTAAATCATACGTGGCACTCTCTATTATTTCTCTTCTATCATGTTGCACCAATGCACAACTTGTTGATAACTTCTATGCAGCAACATGCCCTAGCCTCGAAACCACTGAACGCAATACAATGACCAGTGCTATCCAAAATGAATCCAGAATTGGTGCTGCTATACTTCGCATGTTTTTCCATGGTTGCTTTGTTAATGGATGTGATGGATCAATCTTATTGGATGACACTGCTATGTTTACGG 256 0.3945 MTTFTKSYVALSIISLLSCCTNAQLVDNFYAATCPSLETTERNTMTSAIQNESRIGAAILRMFFHGCFVNGCDGSILLDDTAMFT 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5748 85 Gene3D - 25 85 - -
Psa5g5748 85 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Psa5g5748 85 ProSiteProfiles Plant heme peroxidase family profile. 24 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5748 85 PANTHER PEROXIDASE 72-RELATED 10 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5748 85 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Psa5g5748 85 Pfam Peroxidase 42 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g5748 85 PANTHER PEROXIDASE 10 85 - -
Psa5g5748 85 SUPERFAMILY Heme-dependent peroxidases 24 84 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g5748 85 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g5748 85 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5748 Psa-Chr5 499625850 499626203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5748 23 85 Peroxidase AT5G05340 61.905 7.88e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5748 K00430 - gmx:100806309 112.079