Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5737 ATGGTTGGTACTCCAATGAATGGAAGAAGGCTCTCTTTTGGATTTGGAAATGGTGGACATGAGCTTGGTCCTAGTAGTACTCCACCAAGCAATGCTGGTTCTGATTATGGAAGCTTCGTAGATTTCACAAGAGATGATGTTGAGGCTCTTCTTAATGAGAAATCCAAAAGGAAAGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGTATTAGATGGTTTCAAGACCTTGAGTTGAGTTACTCATTAGAGCAAGAGAAGTTAAAGAGTTCATTGGAATTGTCTCAACAAAAATGCATGGAAATAGAGTTGCTGCTAAAAATCAAGGAAGAAGAACTGAATTCAATTATTACAGAAATGAGAAGAAATTGCAGTTCTTTGCAAGAGAAATTAGTGAAGGAAGAAACTGATAAATCGGCTGCGATGGAATCTCTTGTTAAAGAGAGAGAGGCTAGGCTTGACTTTGAAAGGTCGCAAACTACATTATCAGAAGATCTTGGTAGAGCTCAACGAGAGCTTCAAACTGCGAATCAGAAGATATCATCACTCAATGACATGTATAAGCGATTACAAGAATATATAACAAGCTTGCAACAATACAATGGAAAACTTCATTCTGAGCTTTCTTTGGTTGAAGGTGATCTCAAGCGTGTAGAGAAAGAGAAAGCGACCGTAGTGGAAAATCTTACTATGTTGAAGGGCCAGCTTACCTTGTCTATGGCTTCTCAAGAAGAGGCTACAAAACAGAAGGATGCTTTTGCGGGTGAAGTTACATCCCTTCGGAGCGAGCTGCAACAAGTGAGGGATGATCGGGATCGCCAAATATCTCAAGTGCAAACTTTAAGTACTGAAATAGTCAAGTTTAAAGATTCTTCAGAAAAGTCAGGTTCTGAACTGGACAACTTGACCATGAAAACAAAGGAATTGGAGACAAAATGTACTTTTCAAGATAATCATATAATGGAATTACAAGAGAAGCTAACGATTGCGGAGAACAAACTCGAGGTTTGCGATATATCTGCTATTGAGACAAGAACAGAATTCGAAGGCCAACAAAAACTCGTAAATGAGTTACAAAGGCGATTGGCAGATGCGGAATACAAACTTATAGAAGGCGAGAAGTTGAGAAAAGAATTACATAATACCATTTTGGAACTGAAAGGAAACATTCGTGTGTTCTGTAGAGTGCGGCCTTTGTTACCCGAGGAAGGTTGTAGCGCAGAAGGAAAGACTATATCATATCCTACCTCAATGGAAGCTTCTGGACGAGGTGTTGAATTGGCACAAAATGGACAAAAACATTCTTTCACATTCGATAGAGTTTTTGCACCCGATGCGTCACAACAAGAAGTATTTACAGAAATTTCTCAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTCGCGTATGGTCAGACAGGTTCGGGCAAAACCTATACAATGATGGGCAGGCCTGGACATCCCGGTGAAAAGGGCTTGATACCGCGTTCGCTCGAACAAATATTTCAAACTAAACAGTCTCAACAACCACAAGGATGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACGATTCGCGATTTATTGTCTACAACGAACAAGTCCGCATCAGACGCAACTCGAGTAGAAAATGGTACTCCTGGGAAGCAATACACAATCAAACATGATGCCAGTGGAAATACACATGTTACTGATCTTACAGTGGTTGATGTTCAGAGCGTAAAAGAGGTCGCGTATCTTTTAAACCAAGCGGCAAACAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCAAGAAGTCATTTCGTATTCACTCTTCGAATATACGGTGTAAACGAGAGCACCGACCAACAAGTACAAGGTATTCTAAACCTCATCGATCTTGCTGGGAGCGAACGTCTTTCAAGGAGCGGCTCAACGGGAGACCGACTAAAAGAAACTCAAGCAATAAACAAAAGTTTGTCGTCATTAAGCGATGTTATATTTGCCTTGGCCAAGAAGGAAGATCATATTCCATTCAGAAACTCAAAACTTACATACCTACTTCAGCCTTGTCTAGGTGGAGACTCAAAGACATTAATGTTTGTAAACATCTCTCCCGACCAAGCTTCATCCGGAGAGTCGCTATGCTCACTCCGGTTCGCATCAAGAGTAAACGCTTGTGAAATCGGTACGCCTCGTCGCACCACCACCAACGGCCGCCCGGCAGAATCTCGCCTGAGCTATTTCTAA 2289 0.4067 MVGTPMNGRRLSFGFGNGGHELGPSSTPPSNAGSDYGSFVDFTRDDVEALLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELSYSLEQEKLKSSLELSQQKCMEIELLLKIKEEELNSIITEMRRNCSSLQEKLVKEETDKSAAMESLVKEREARLDFERSQTTLSEDLGRAQRELQTANQKISSLNDMYKRLQEYITSLQQYNGKLHSELSLVEGDLKRVEKEKATVVENLTMLKGQLTLSMASQEEATKQKDAFAGEVTSLRSELQQVRDDRDRQISQVQTLSTEIVKFKDSSEKSGSELDNLTMKTKELETKCTFQDNHIMELQEKLTIAENKLEVCDISAIETRTEFEGQQKLVNELQRRLADAEYKLIEGEKLRKELHNTILELKGNIRVFCRVRPLLPEEGCSAEGKTISYPTSMEASGRGVELAQNGQKHSFTFDRVFAPDASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTTNKSASDATRVENGTPGKQYTIKHDASGNTHVTDLTVVDVQSVKEVAYLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASSGESLCSLRFASRVNACEIGTPRRTTTNGRPAESRLSYF* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5737 762 Coils Coil 358 385 - -
Psa5g5737 762 Gene3D Kinesin motor domain 341 742 IPR036961 -
Psa5g5737 762 CDD KISc_C_terminal 397 742 - -
Psa5g5737 762 Coils Coil 169 203 - -
Psa5g5737 762 Pfam Kinesin motor domain 405 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 738 IPR027417 -
Psa5g5737 762 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 PRINTS Kinesin heavy chain signature 610 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 PRINTS Kinesin heavy chain signature 641 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 PRINTS Kinesin heavy chain signature 690 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 PANTHER KINESIN-LIKE PROTEIN 13 761 - -
Psa5g5737 762 Coils Coil 120 147 - -
Psa5g5737 762 Coils Coil 225 245 - -
Psa5g5737 762 ProSiteProfiles Kinesin motor domain profile. 399 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g5737 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 13 761 - -
Psa5g5737 762 SMART kinesin_4 397 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5737 Psa-Chr5 498803544 498807812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5737 371 737 Calmodulin-binding Proteins AT5G65930 40.054 1.56e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5737 K10405 - gmx:100801196 1266.91