Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5731 ATGAAAGAGGAATCTACAGGATTAATTATTGGGATTTCTATAGGTGTTGTAATTGGAGTTGTTTTGGCTATTTCTGCATTGATCTGTTTTAGATATCATAGGAAGCGATCACAGATAGGGAATAGTAGTTCTCGGAGGGCCGCTACGATACCGATTCGCGCTAATGGTGCTGATTCTTGTACTATTTTATCAGATTCAACCTTAGCTCCTGAATCTCCTGTTAGGTCTGGAAGAAATGGCATGAACTTTTGGATTGATGGTTTCAAGAAGACTAACATGATTTCTGCATCTGGAATACTCGAATATTCATACAAGGACTTGCAAAAGGCGACGTATAATTTCACAACACTGATAGGACAAGGTGCATTTGGTCTTGTATATAAAGCTCAAATGTCTACTGGTGAAACTGTTGCGGTGAAAGTTCTTGCAACCAATTCTAAACAAGGGGAGAAAGAATTTCACACCGAGGTTATGTTGTTGGGAAGGTTACACCACAGAAACTTGGTGAATCTGGTTGGATATTGTGCAGAAAAGGGCCAACATATGCTTGTTTATGTCTACATGAGTAAAGGCAACTTGGCTTCCCACTTGTACAGTGAAGAGAATGGGAATCTAGGATGGGATTTGAGGGTTCATATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCCGTTCCTCCTGTCATTCATCGCGACATCAAATCTAACAATATTCTATTGGATCAGTCCATGCGAGCCCGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGCGGTACCTTTGGCTATCTTGATCCCGAGTATATATCTTCAGGGACATTCACGAAGAAAAGTGACGTATACAGTTTTGGAGTGTTGCTCTTTGAACTCATAGCCGGACGAAATCCTCAGCAGGGTCTTATGGAATACGTTGAACTCGCAGCGATGAACACCGAAGGGAAAGTCGGTTGGGAGGAGATTGTTGATTCAAAGCTCGAAGGAAAATGTGATTTCCAAGAGTTAAATGAAGTGGCAGCACTTGCATACAAATGCATCAACCGCGCTCCGAGGAAGCGTCCTTCGATGAGGGACATAGTTCAAGTATTGACTCGGATCCTTAAATCAAGGCACCAGAGGAATCATCATCACAAGAATTCGCTTTCGGAGACGGCAGATGAAGTTGCAATGGATGTTGATGAGGCGGAAAATAAGGATTCTGTTACTACTGACCACCACAGAAGAGATGAATCTATAGATAGTACAACTGACATGTATGATTTGTGA 1299 0.4211 MKEESTGLIIGISIGVVIGVVLAISALICFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLAPESPVRSGRNGMNFWIDGFKKTNMISASGILEYSYKDLQKATYNFTTLIGQGAFGLVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSKLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRILKSRHQRNHHHKNSLSETADEVAMDVDEAENKDSVTTDHHRRDESIDSTTDMYDL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5731 432 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 404 - -
Psa5g5731 432 CDD STKc_IRAK 118 377 - -
Psa5g5731 432 SUPERFAMILY Protein kinase-like (PK-like) 104 387 IPR011009 -
Psa5g5731 432 Gene3D Transferase(Phosphotransferase) domain 1 188 403 - -
Psa5g5731 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Psa5g5731 432 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5731 432 PANTHER OS01G0253100 PROTEIN 5 404 IPR045271 GO:0004714|GO:0006468
Psa5g5731 432 MobiDBLite consensus disorder prediction 406 426 - -
Psa5g5731 432 MobiDBLite consensus disorder prediction 406 432 - -
Psa5g5731 432 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Psa5g5731 432 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5731 432 Coils Coil 389 409 - -
Psa5g5731 432 Gene3D Phosphorylase Kinase; domain 1 85 187 - -
Psa5g5731 432 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5731 Psa-Chr5 498647738 498650844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5731 24 374 Glycoside Hydrolase AT3G07070 40.270 3.24e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Psa5g5731 PK_Tyr_Ser-Thr 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5731 - - gmx:100799586 761.911