Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5707 ATGAACATTATGTCTATCATCAAAATGATTATAATTTTCTATGCTTATCATATACTTATACATGTTTCACAAGTTTCTCTAGCATTTGACTCAATATCTCACTCCATTTCCCTAATAGATGATGGCAACACCTTAGTTTCCAAAGGTGGAACCTATGAACTTGGATTCTTCACCCCAGGAAATTCCAATAAACGTTACCTTGGTATTTGGTACAAGAAAATCCCTATTCAAACAGTGGTTTGGGTTGCAAATAGGCTCAACCCAATCAATGGTTCATCTGGAACATTAACATTAAACAACATCACTGGCAACCTTGTCCTCACTCAGAAGAATAATGAAACTGTTGTTTGGTCTACAACATCAAATCATCTTACAAAAAAACAAGAGAATCGATTGGCAATACTTTTAGATTCTGGTAATCTTGTGATACTAGATGAAAAAGAAGAAAACAAAGAACTATATTTGTGGCAAAGTTTTGATTATCCAACAGACACTTTCTTACCAGAAATGAAGTTTGGTTTGGATTTTCGAACCGGTCTTAATCGGCGCTTAACGGCTTGGAAGAGTCCTGATGATCCATCACCTGGTGATTTTTCTTTTGGTATGGTTCCACATAACTATCCTGATGCATATATGATGAAGGGTGATAAAAAATTCTACAGAAGTGGACCATGGAATGGTTTGCATGCAAGTGGTTCACCACAAGTTAAGCCAAATCCAATTTATGATTACAGGTTTGTTTATAATAAGGATGAATTTTACTATACTTACAGCCTCAAAAACTCGTCTGCTGTAACACGGTTAGTTTTGAATGCAACTGCATACGTTCGTTACCGTTACATATGGATCGAATCAGCGAAAAGGTGGGAAATCTACACATCAGTACCGTTGGATTTATGCGATAGTTATGCACTTTGTGGAGCTTATTCAAGCTGTGTTATCTCTGATTCACCTGTGTGTCAATGCATGGAAGGTTTTAAACCTAAATTTCCGCAAGCGTGGTATTCGATGGATTGGTCTAATGGATGTGTTCGAAATAAGGCATTACATTGCGAGGACAAACAAAAAGACGGGTTTGTGAAATTGAGTGGTATGAAAGGGCCTGACACTACGTATAGTTGGTTTGATCAAACAATTGGGTTGGAGGAATGTAGAGTTAAGTGTTTGGAGAATTGTTCTTGCATGGCTTATGCAAATTCAGATGTAAGAGGAGAAGGAAATGGATGTGCTTTGTGGTTTGGTGATTTAGTTGACATTAGACAGTTTGCAGCTGGAGGACAAGATTTATATGTTAGAATGGAAGCTTCAGAATTAGAACATGTCAATGAGGGTCACAAGAAGAAAGGTGTGTTAGTGGCAGTAACAGTTTCTCTTGCCATGGCAATGCTTTCTGGTATAACTATACTTGGTTGGTGTTATAGACAGAAATCACAAAACAATGTAAAAGATAAGTCAGATTTGAGTATCAAAGACCATCTAAAGAGTGGAATGCAAGTGGATGATGGAGATCTACCAGTCTTTCACTTGTCAACAATGGCAAAAGCCACCAACAACTTTACACTCAGCAACAAAATTGGGGAAGGTGGCTTTGGGCCTGTATATAGGGGGATTCTAGTAGATGGATTAGAAATTGCTGTGAAAAGGCTTTCGAAAAACTCAGGTCAAGGATTGAATGAGTTTAAAAATGAAGTAAAGTTGATTGCGAAACTTCAACACCGAAATCTCGTAAAGCTTCTTGGTTGTTGCCTTGATGAAGAAGAAAAGATGCTGGTTTATGAATACATGCCTAATAGTAGCTTGGACTCCTTCATTTTTGATAAGCTGAAAAGCGAAATACTAGATTGGTCAAAGCGTTTCGACATTATATGTGGTATTGCAAGAGGACTTGTGTATCTTCATCAAGATTCGAGACTACGGATTATTCACAGAGATCTAAAAGCTAGTAATGTTTTACTAGACAAGGAATTGAATCCTAAAATTTCAGATTTTGGCATGGCTAGAATTTTCGGAGGAGATCAAAATGAAGGAAACACAAAGAGAATAGTCGGAACATATGGTTACATGGCACCAGAATATGCTACGGACGGTCTATTTTCAGTGAAATCAGATGTCTTCAGCTTCGGAGTTTTGTTGATGGAGATTATATCCGGGAAAAGAAGTAGAGGATACTATAATCAAAACCAAAGCCATAATCTCATAGGTTATGCATGGAAATTGTGGAAAGAAGGAAGACCAATAAAATTGATTGATAAAAACATAGGGGAATCTTGTTTTATATCACAAATATTGCATTGTGTTCATGTTAGTCTCTTGTGTGTTCAGCAGAATCCTGAGGATAGACCTATAATGTCATCTGTGATTCTAATGTTGGTAAGTGAGTTTGATTTGGCTGAACCTAAACAACCAGGATTCCTTTTGAAAGATTCAAGTGAAGCTGACTCCTCCACAAGTAAACATTTGTTGAGTTCTGCAAATGAAATAACCATTACACTATTGGAAGCTAGATGA 2508 0.3712 MNIMSIIKMIIIFYAYHILIHVSQVSLAFDSISHSISLIDDGNTLVSKGGTYELGFFTPGNSNKRYLGIWYKKIPIQTVVWVANRLNPINGSSGTLTLNNITGNLVLTQKNNETVVWSTTSNHLTKKQENRLAILLDSGNLVILDEKEENKELYLWQSFDYPTDTFLPEMKFGLDFRTGLNRRLTAWKSPDDPSPGDFSFGMVPHNYPDAYMMKGDKKFYRSGPWNGLHASGSPQVKPNPIYDYRFVYNKDEFYYTYSLKNSSAVTRLVLNATAYVRYRYIWIESAKRWEIYTSVPLDLCDSYALCGAYSSCVISDSPVCQCMEGFKPKFPQAWYSMDWSNGCVRNKALHCEDKQKDGFVKLSGMKGPDTTYSWFDQTIGLEECRVKCLENCSCMAYANSDVRGEGNGCALWFGDLVDIRQFAAGGQDLYVRMEASELEHVNEGHKKKGVLVAVTVSLAMAMLSGITILGWCYRQKSQNNVKDKSDLSIKDHLKSGMQVDDGDLPVFHLSTMAKATNNFTLSNKIGEGGFGPVYRGILVDGLEIAVKRLSKNSGQGLNEFKNEVKLIAKLQHRNLVKLLGCCLDEEEKMLVYEYMPNSSLDSFIFDKLKSEILDWSKRFDIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMARIFGGDQNEGNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNQSHNLIGYAWKLWKEGRPIKLIDKNIGESCFISQILHCVHVSLLCVQQNPEDRPIMSSVILMLVSEFDLAEPKQPGFLLKDSSEADSSTSKHLLSSANEITITLLEAR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5707 835 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Psa5g5707 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 193 IPR036426 -
Psa5g5707 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Psa5g5707 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Psa5g5707 835 CDD B_lectin 41 162 IPR001480 -
Psa5g5707 835 Pfam S-locus glycoprotein domain 220 330 IPR000858 GO:0048544
Psa5g5707 835 PANTHER - 29 832 - -
Psa5g5707 835 Gene3D - 28 159 IPR036426 -
Psa5g5707 835 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5707 835 Pfam PAN-like domain 351 419 IPR003609 -
Psa5g5707 835 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Psa5g5707 835 SMART serkin_6 519 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5707 835 SMART blect_4 36 162 IPR001480 -
Psa5g5707 835 Coils Coil 831 835 - -
Psa5g5707 835 CDD PAN_AP_plant 349 432 - -
Psa5g5707 835 ProSiteProfiles PAN/Apple domain profile. 351 434 IPR003609 -
Psa5g5707 835 CDD STKc_IRAK 525 790 - -
Psa5g5707 835 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Psa5g5707 835 Pfam D-mannose binding lectin 78 188 IPR001480 -
Psa5g5707 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 832 - -
Psa5g5707 835 ProSiteProfiles Bulb-type lectin domain profile. 30 156 IPR001480 -
Psa5g5707 835 SMART ntp_6 354 433 IPR003609 -
Psa5g5707 835 Pfam Domain of unknown function (DUF3403) 794 835 IPR021820 GO:0004674
Psa5g5707 835 SUPERFAMILY Protein kinase-like (PK-like) 504 799 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5707 Psa-Chr5 496474953 496478909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5707 507 835 Receptor kinase-like Gene Family AT4G11530 56.973 5.10e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5707 PK_Tyr_Ser-Thr 4.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5707 - - gmx:100778155 1324.69