Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5693 CTGCCAGATACATCAAAATCTTGGTTTAACAAGAGCATAAACCTTGAAGAATGTGAAAGATTGTGTTTAAGAAACTGTTCTTGCACAGCTTATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGATTTGGTTTAATAACATTTTGGATGTCAAAAAACTAAGCTATGGAGGACAAGACTTTTACATGAGAGTTGCAGCTTCAGAACTAGGTGCTAACACAGACTTGAAGAAGAAGAAGCTTGCAGGAATTCTAGTAGGCTGTATAATGTCTGTTGTGATCATGATAATACTCGGAGTCGCCATACATCGCGTCCGGAAGAAGAAACTTGAGAAACAAGGGAATAATCAACCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCTAATGCAACTAATAACTTCTCCATTGATAACAAATTGGGGCAGGGAGGTTTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATCGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAAACTTCAGCATAGAAATCTTGTTAAACTACTTGGCTGTTGCATTCAAGGTGATGAGAAACTCTTGATCTACGAATTCATGATCAACAGAAGCTTGGACTACTTAATTTTCGACCAAACTAGAAAAAGTTTACTGCGTTGGACTCGACGATTCCAAATTATTCGTGGGATTGCTCGAGGACTTGTTTATCTTCATGAAGATTCTAGATTAAGGATTATCCACCGAGATCTCAAGACAAGCAATATTCTTCTTGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTAAAGGTGAAACAAGAAGAGTAGTAGGAACTCACGGTTACATATCTCCAGAATATGCAACACGTGGATTTTTCTCGGTGAAGTCAGATGTATTTAGTTTTGGTGTTATTATACTAGAAACAATTAGTGGAAAAAAGAACAGGGAATATAGTGACTATCATGATCTCGATCTTCTTGGATATGCATGGAGAAAGTGGTGTGAAAAAAAGGCATTGGAGGTGATAGATGAACCTCTGAGCGATTCGATTGTTGTAGCAGAAGCAGAGATATTGAGATGTATACAGATAGGTCTTTTATGTGTTCAAGAGAGAGCTGATGATAGGCCAACTATGTCAGCTGTAATTCTAATGCTGAATGGTGAAAAAACATTGCCTGAGCCAAAGGAACCAGCTTTTTATCCACACCAATTTGGCTCTTCATCAGAAGGAACTATTAAACTACATTCAAATAATGAAGTTTCTATAACATTGTTACAAGCAAGATAG 1383 0.3695 LPDTSKSWFNKSINLEECERLCLRNCSCTAYANLDIRDGGSGCLIWFNNILDVKKLSYGGQDFYMRVAASELGANTDLKKKKLAGILVGCIMSVVIMIILGVAIHRVRKKKLEKQGNNQPNNNDNEDIDIPIFDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIAKLQHRNLVKLLGCCIQGDEKLLIYEFMINRSLDYLIFDQTRKSLLRWTRRFQIIRGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRVVGTHGYISPEYATRGFFSVKSDVFSFGVIILETISGKKNREYSDYHDLDLLGYAWRKWCEKKALEVIDEPLSDSIVVAEAEILRCIQIGLLCVQERADDRPTMSAVILMLNGEKTLPEPKEPAFYPHQFGSSSEGTIKLHSNNEVSITLLQAR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5693 460 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 460 - -
Psa5g5693 460 ProSiteProfiles Protein kinase domain profile. 145 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5693 460 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 460 - -
Psa5g5693 460 CDD STKc_IRAK 151 419 - -
Psa5g5693 460 Gene3D Phosphorylase Kinase; domain 1 117 220 - -
Psa5g5693 460 Pfam Protein tyrosine and serine/threonine kinase 146 414 IPR001245 GO:0004672|GO:0006468
Psa5g5693 460 CDD PAN_AP_plant 1 68 - -
Psa5g5693 460 SUPERFAMILY Protein kinase-like (PK-like) 125 417 IPR011009 -
Psa5g5693 460 Pfam PAN-like domain 1 53 IPR003609 -
Psa5g5693 460 SMART serkin_6 145 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5693 460 ProSiteProfiles PAN/Apple domain profile. 1 68 IPR003609 -
Psa5g5693 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Psa5g5693 460 Gene3D Transferase(Phosphotransferase) domain 1 221 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5693 Psa-Chr5 495527206 495529734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5693 83 443 Receptor kinase-like Gene Family AT4G23190 50.404 5.66e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g5693 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5693 - - ccaj:109805721 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5693 5 495527206 495529734 Psa5g5693 5 495527206 495529734 ECH