Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5687 ATGGATTCCAAGAGCGGGTTCGCCGAACTTACTGAAAAGGAAAAGGATGTTGTAAATGGCTACTTCGATATAGAAGAGTTATTCATGCCCAAAGAAACCTTCTTCAGAAGCGCTAAGAACATTTTTCTCCGCAGGCACGCCGTTGCAATAATCAGCAAGCTCTCGGGGAGGATTGATCCTGATACACTTATTCCGTATCTTGCTATGAACTATTTTGATCGCTTTTTTTCCAAGTCCGATTCGATCTTGGAGGATGTTGAAGGATTCATTGATACTCAAAAAGTCCGTTTGATTGCTCTAGCTTGTCTCACCATATCTGCCAAGCTGAGGATAAAAGACTTCTCAATTGATCAGTTTTTGATTAATCATTATAAGGATGTGAATGTGAGGATAAGTCATCAAATGGTAATGAGAACAGAGCTTCTCATTCTCCGTGAGCTTGAGTGGGAAATACTACCGGTGACTCCCTTCACCTTTCTGGACTTCTACTACCGTTACTTCGAAAACTACGGTGGTTTTAAACGTCGTTGCATCAATGAGATAATAGTTCAAGCTCAAGGAGAGCACACCTTTGTTGACTATTATCCTACTATGATAACAATCTCCGCTTTTCTGGCTGCTTCCAAAATTGCATATCCCAAACTGTATAGACAAATTGTAGTTCCCTTCACAGTTTCCAGAGTTTTCCCAAAGGTGCTTCAGGATAATATCACTGTTTGTGTGGATGAGATGGTTGGTCTTTGCAATAGATTGAACATCCGGATTGAGACCCCGGTTCCCTCCACTTCAAAGTTAAACGAAAGCCTACAAAACAGGGGCAAGATGGGGATGGTAGTTGTTTCATCTGAAGATGATGACGAAGGAGATGGGACTCCGTTAATAAGGCGAATTCAGGACATGAACAGGATGACGATGAGTTCTCAGGCGCTGAAGATATCAGAGGGGGTTGAGGAAGAAAACAAAAAAGTGGCCAAGGACAATGAAAAGGCAGAGGATAAAGCAGAAACATCTGGTGGTGGTTCTAAGGCCAGGATTGAGGCTATAATCCGACAACCGTTGGAAACGGGCAAGGCAGTAGCGGGTGAGAAGATGGAGGGATACATTTCAGAAATCGCAGAGCTTGAAGAACGAAAGAGCCTAATGTACTTTGAACTGAAGTGGCCCGATGATGTTCCATCCACTGAACCGCAATCACCAACAACTATCCGTTCTAATTCAATAAGAATAATTCAAAGAGCTGGCAAGAAACTAACTTGTGGTAGCTGCAAAATCGGTTAG 1278 0.4264 MDSKSGFAELTEKEKDVVNGYFDIEELFMPKETFFRSAKNIFLRRHAVAIISKLSGRIDPDTLIPYLAMNYFDRFFSKSDSILEDVEGFIDTQKVRLIALACLTISAKLRIKDFSIDQFLINHYKDVNVRISHQMVMRTELLILRELEWEILPVTPFTFLDFYYRYFENYGGFKRRCINEIIVQAQGEHTFVDYYPTMITISAFLAASKIAYPKLYRQIVVPFTVSRVFPKVLQDNITVCVDEMVGLCNRLNIRIETPVPSTSKLNESLQNRGKMGMVVVSSEDDDEGDGTPLIRRIQDMNRMTMSSQALKISEGVEEENKKVAKDNEKAEDKAETSGGGSKARIEAIIRQPLETGKAVAGEKMEGYISEIAELEERKSLMYFELKWPDDVPSTEPQSPTTIRSNSIRIIQRAGKKLTCGSCKIG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5687 425 Gene3D - 31 152 - -
Psa5g5687 425 MobiDBLite consensus disorder prediction 314 339 - -
Psa5g5687 425 PANTHER CYCLINS 11 394 IPR039361 -
Psa5g5687 425 Coils Coil 357 377 - -
Psa5g5687 425 Coils Coil 313 333 - -
Psa5g5687 425 Pfam Cyclin, N-terminal domain 22 151 IPR006671 -
Psa5g5687 425 SUPERFAMILY Cyclin-like 11 151 IPR036915 -
Psa5g5687 425 CDD CYCLIN 43 144 IPR013763 -
Psa5g5687 425 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 11 394 - -
Psa5g5687 425 MobiDBLite consensus disorder prediction 312 343 - -
Psa5g5687 425 Gene3D - 22 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5687 Psa-Chr5 493527872 493530651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5687 19 208 Core Cell Cycle Gene Families AT4G03270 31.034 7.57e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5687 - K18812 aprc:113855478 222.631