Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5686 ATGGATTCCGAAACGGAATTCCCTGTTCCTAATCGGATGGAATCCGAACTCATAAAGGAATACTTTGAAACTGAATCTCGATTCATTGCTGTTAGGAGCTACTACCAAATTTATCAGAACGTTCTTATACGGAAGGATGCTGTTTCAATAATCGCCAGGGTCTCGAGGAGAATTGATTCTGATACATATATTCCGTATCTTGCTATGAACTACTTTGATCGCCTCTGTTCAAGGAACACAAATATCATGAAGGATAAGGACGTGGAAGGTCATAGTGCTGAGGAAAGATTTCGATTGATTGCAATGGGTTGTCTCACCATATCTGCCAAGATGAGGACAAAAAACTTCTCTGTTGATCAGCTTTTGAGCGCCATGAAATCCAGGAAAGGGAATATAACTCATCAGATGGTAAAGAAAGTGGAGAATCTCATTCTTGATGAACTTAATTGGAAAATGCTACCGGTGACTGCCTTCTGCTTTCTGAATCACTATTACCCTTACTTCAAAGAATTCGGTGGCTTTAGACGTCGTTGCATCAATGAGATCATAGTTCAAGCTCAGGGAGAACACACATTTATTAGATACACACCTTCTCAGATTGCATTGTCCGCGTTTATGGCTGCTTCCAAAATTGCATACCCCTCAAAATATGACAAAATACAAAATCCTTCTAACTTTCACAAGATTGACAATGAAGAGCTGGTGAAGAAATGTTCGGATCAGATGGTAGATCTTTGCGATAGATGGAACATCCATATTGAGCCTGCTGAATCAGGAATTGGCTCCCCATGTAATAAAGTAATTTTGCTAGGACCCCCAGAGGAAACCAAAGAAGTTGGAACTTCAAAGGTAAAGGAAATCCAACAAAGAAATAGCATGGCTGTGGTGGGGGATTCAAGCAAGAGCAATGCTGCTGTGGTGAATTCATGTGAGGAAGAAGAAAAACAAAATGGGACTGCAATAATCAACGGGTTTGGAACTTCAAATGCAAAGGAAATCCAACAAGGCAATGGCAAGGTGGGTTCAAGTGAAGAAAAAGAAAAGGAAAATGGGACTGCGATAATCAACGGGTTTGGAACTTCAAATGCAAATGAAATCCAACAAGGCAATGGCAAGGTATCTGTGGTGGGTTCAAGTGAAGAAAAAGAAAAGGAAAATGGGGCTGCGATAATCAATGGGGTTGGAACTTCAAATGTAAAGGAAATCCAACAAGGCAATGGCAAGGTGGGTTCAAGTGAAGAAAAAGAAAAGGAAAATGGGGCTGCGATAATCAATGGGGTTGGAACTTCAAATGTAAAGGAAATCCAACAAGGCAATGGCAAGGTGGGTTCAAGTGAAGAAAAAGAAAATGGGGCTGCGATAATCAATGGGGTTGGAACTTCAAATGTAAAGGAAATCCAACAAGGCAATGGCAAGGTGGCTGTGGTGGGTTCAAGTGAAGAAAAAGAAAAGGAAAACGGGACTGCGATAAACAACGGGGTTGGAACTTCAAAGGTAATGGAAATCCAACACAGCAAGAGCAAGGGTGTGGTGGTGGATTTATGTGAAGAAGAAGATGAAGATGAAGAAGTTGGGACTGCGTTAATCCAGCGAAGACAAGTCATGAGAAACACAGATCCTTCTCATGCGCAGGTGCGCATGCAGGTGGATGTGATCCAACTCCCGAAAGATGATAAAGACAGGGTTGAGGATATAATCCGACGATCACTGGAAAAGTGCATGGCAGTAGAGGCTGAAGAGCCACAGATACAGATGAGGGGGTCAAGTTCAGGGATTGTAGATCTTGTTGAACCATTGAACTTTAAGCTGAAGTGGTTCATTTGA 1824 0.4183 MDSETEFPVPNRMESELIKEYFETESRFIAVRSYYQIYQNVLIRKDAVSIIARVSRRIDSDTYIPYLAMNYFDRLCSRNTNIMKDKDVEGHSAEERFRLIAMGCLTISAKMRTKNFSVDQLLSAMKSRKGNITHQMVKKVENLILDELNWKMLPVTAFCFLNHYYPYFKEFGGFRRRCINEIIVQAQGEHTFIRYTPSQIALSAFMAASKIAYPSKYDKIQNPSNFHKIDNEELVKKCSDQMVDLCDRWNIHIEPAESGIGSPCNKVILLGPPEETKEVGTSKVKEIQQRNSMAVVGDSSKSNAAVVNSCEEEEKQNGTAIINGFGTSNAKEIQQGNGKVGSSEEKEKENGTAIINGFGTSNANEIQQGNGKVSVVGSSEEKEKENGAAIINGVGTSNVKEIQQGNGKVGSSEEKEKENGAAIINGVGTSNVKEIQQGNGKVGSSEEKENGAAIINGVGTSNVKEIQQGNGKVAVVGSSEEKEKENGTAINNGVGTSKVMEIQHSKSKGVVVDLCEEEDEDEEVGTALIQRRQVMRNTDPSHAQVRMQVDVIQLPKDDKDRVEDIIRRSLEKCMAVEAEEPQIQMRGSSSGIVDLVEPLNFKLKWFI* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5686 607 CDD CYCLIN 44 145 IPR013763 -
Psa5g5686 607 Gene3D - 31 153 - -
Psa5g5686 607 PANTHER CYCLINS 1 276 IPR039361 -
Psa5g5686 607 Pfam Cyclin, N-terminal domain 18 152 IPR006671 -
Psa5g5686 607 SUPERFAMILY Cyclin-like 15 152 IPR036915 -
Psa5g5686 607 Gene3D - 19 242 - -
Psa5g5686 607 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 276 - -
Psa5g5686 607 Pfam Cyclin, C-terminal domain 156 246 IPR004367 -
Psa5g5686 607 SMART cyclin_7 49 146 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5686 Psa-Chr5 493509517 493512546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5686 44 222 Core Cell Cycle Gene Families AT4G03270 29.570 6.47e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5686 - K18812 aprc:113855478 252.677