Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5672 ATGGCATTGATGGCAGCTACAGCAAGCTCAGCAACTGTTGTTAAGCAAACTCCTTTCCTTGGTCAAAGGAAGAGTGCCAATCCTCTTAGAGATGTTGTTGCCATGGGAACTTCCAAATTCACCATGGGAAATGATTTGTGGTATGGACCAGACAGAGTGAAATATTTAGGACCATTTTCAGCTCAGACTCCTTCATACTTGACTGGAGAATTCCCTGGTGATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCAGAAGCATTTGCCAAGAACCGGGCTCTTGAGGTGATCCATGGAAGATGGGCTATGCTAGGAGCACTAGGATGCATAACACCAGAAGTACTTCAAAAATGGGTTAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAGATTTTCTCAGAAGGTGGACTAGACTATTTAGGAAACCCTAACCTTGTTCATGCACAAAGTATCTTAGCAGTACTAGGTTTCCAAATTGTTCTAATGGGACTCGTCGAAGGTTTTCGCATCAACGGACTTCCCGATGTCGGAGAAGGCAATGATCTTTACCCTGGTGGGCAATACTTTGATCCTCTTGGTCTTGCCGACGATCCGGTTACTTTCGCCGAGCTTAAAGTGAAGGAGATCAAGAATGGGAGATTGGCTATGTTCTCTATGTTTGGTTTCTTTGTTCAAGCTATTGTGACTGGTAAAGGACCTTTGGAGAATCTGTTGGATCACCTTGATAACCCTGTTGCTAACAATGCTTGGGTTTATGCTACAAAGTTTGTGCCTGGTGCTTAA 798 0.4398 MALMAATASSATVVKQTPFLGQRKSANPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5672 265 Pfam Chlorophyll A-B binding protein 64 231 IPR022796 -
Psa5g5672 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 13, CHLOROPLASTIC 3 265 - -
Psa5g5672 265 Gene3D Chlorophyll a/b binding protein domain 54 258 - -
Psa5g5672 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 265 IPR001344 GO:0009765|GO:0016020
Psa5g5672 265 SUPERFAMILY Chlorophyll a-b binding protein 46 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5672 Psa-Chr5 492668391 492670361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5672 10 264 Chloroplast and Mitochondria Gene Families AT2G05070 68.421 2.38e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5672 K08914 - sly:101243766 508.834