Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5604 ATGAAGCTTCTTCGAAAACATATTTGCATCTTCTTGTTTCTTTTTAGTTTAATTTCATGTTCACAAGGCTATACGTTTTATGCTGGTGGAAAAGATGGATGGGTTTTGAATCCTTCTGAAAGTTACAATCAATGGACTGCGAGGAATAGGTTCCAAGTCAATGATATTCTAGTTTTTAAGTACAAGAAGGAGTCAAACTCAGTGTTGGTGGTGAACAAAGAGGATTATGACGAGTGCAATAAGAAGAATCCGATCAAGAAATTTGAAGATGATGATTCTGAGTTTCAATTTGATAGATCTGGTCCCTTTTATTTCATTAGTGGAAAAGATCATAATTGTGAAAATGGTCAAAAATTGATTGTTGTGGTGTTGGCTGTGAGAGAACCTCCTCCTTATGTGTCTACTCCTCCTCCCAAGCTTCTTCCTACACCTCCTTATGTTCCAATTACACCTCCAAAAACACCTTCTCCTATTTACGCCCCACCTAATGTTCCCTATACTCCTCCAAAAGCCCCTTCTCCGGGAAATGAACCACCATATATACCAATTACACCCCCTAAAACTCCTTCTCCTATTCACACTCCTCCTAATGTTCCTTATACTCCTCCAAAAGCACCTTCTCCTGGAAATGAACCACCCTATACACCAATTACACCTCCAAAAACACCTTCTCCTACTCACACTCCTCCTAATGTTCCATATACTCCTCCAAAATCAGCTTCTCCTATTCACACTCCTCCTAATGCTCCATATACTCCACCAAAAGCACATTCCCCTGGAAATCAACCACCCTATGTACCAATCACACCACCAAACACTCCTTCTCCTATTTACACCCCTCCAAATCATCCCCATACTCCTCCAAAAGCACCTTCCCCTAGCAATCAACCACCCTATGTTCGCCGGTGTCAACCACTACTCCAACAGCATCTCCTACAGGGTCCCTCCCGGCAGCAACAACTCCGTCACCTTCATCCAATGCTCCTGGAACACCGTCATCTACTACCACAGGAAGTCCATCACCGACATCATCGAATGAAACGGCGCCAGGGAGGTCAAGCGGAGTGTCGTATGCGAGTCCGTCGGGGGTATGGGGTTACTCCATTACAATTTTGGTCGGTGCTGCACTCACGAGTACTATTCTAG 1146 0.4389 MKLLRKHICIFLFLFSLISCSQGYTFYAGGKDGWVLNPSESYNQWTARNRFQVNDILVFKYKKESNSVLVVNKEDYDECNKKNPIKKFEDDDSEFQFDRSGPFYFISGKDHNCENGQKLIVVVLAVREPPPYVSTPPPKLLPTPPYVPITPPKTPSPIYAPPNVPYTPPKAPSPGNEPPYIPITPPKTPSPIHTPPNVPYTPPKAPSPGNEPPYTPITPPKTPSPTHTPPNVPYTPPKSASPIHTPPNAPYTPPKAHSPGNQPPYVPITPPNTPSPIYTPPNHPHTPPKAPSPSNQPPYVRRCQPLLQQHLLQGPSRQQQLRHLHPMLLEHRHLLPQEVHHRHHRMKRRQGGQAECRMRVRRGYGVTPLQFWSVLHSRVLF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5604 381 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Psa5g5604 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Psa5g5604 381 PANTHER EARLY NODULIN-LIKE PROTEIN 2 6 160 - -
Psa5g5604 381 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Psa5g5604 381 CDD OsENODL1_like 24 124 IPR041846 -
Psa5g5604 381 Gene3D - 24 127 IPR008972 -
Psa5g5604 381 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Psa5g5604 381 PANTHER BLUE COPPER PROTEIN 6 160 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5604 Psa-Chr5 489198525 489201004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5604 1 275 Phytocyanin Superfamily AT5G53870 41.751 5.84e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5604 - - mtr:MTR_2g079030 388.267