Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5603 ATGGCTCGTACTAAGCAAACAGCACGCAAATCCACCGGAGGCAAAGCACCAAGGAAGCAGTTAGCAACAAAAGCTGCTCGGAAATCATCACCGACAACTGTATTTTGGACGGATTATGTCGCTACAAGGTGGTATAGAGCTCCCGAGCTATGTGGATCATTTTACTCAAAGTACACACCAGCGATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTATTAACAGGAAAACCTCTTTTTCCTGGAAAGAATGTGGTCCATCAATTGGATCTGATGACAGATCTTCTCGGCACTCCCTCACTGGATACTATATCACGAGTGCGCAACGAGAAGGCAAGAAGATACCTTACTAGCACTCTATCCAAGTGTCGTGGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAA 420 0.4405 MARTKQTARKSTGGKAPRKQLATKAARKSSPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSTLSKCRGSIQKAVCSSRGKW* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5603 139 Pfam Protein kinase domain 25 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5603 139 ProSitePatterns Histone H3 signature 1. 15 21 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa5g5603 139 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 28 123 - -
Psa5g5603 139 MobiDBLite consensus disorder prediction 1 26 - -
Psa5g5603 139 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa5g5603 139 PRINTS Histone H3 signature 17 31 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa5g5603 139 Gene3D Transferase(Phosphotransferase) domain 1 26 131 - -
Psa5g5603 139 SUPERFAMILY Protein kinase-like (PK-like) 29 119 IPR011009 -
Psa5g5603 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g5603 139 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 28 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5603 Psa-Chr5 489156522 489157140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5603 24 123 MAP Kinase Gene Family AT2G42880 89.000 4.30e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa5g5603 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5603 - - cpap:110815040 191.815