Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5585 ATGGACTCTTGCATGACACTCTTGAGACTCCTCCGTCTGCGCACATCCGACCCTCCAGGCTCTCCTCCTTTAGCCACATCTTCAGTATCCAACCATCCCGTCCCCCTCTTTCCCTGCACACCATCTGAACCACTTCCCTCTCAACGCTCCCACCTCGCCGCCTTGCCCAGTACAATGCCTTTAGCCGGTGCCAACTACTCATGGCGTTCATATAAGGACCCCATCACCGAGTTTTTGGCTTGTGTTTACGTCAACTATGACTTTGATGGCGCACAAAAGAAGATGAGGGAGTGTGAAGAAGTAATTCTCAATGACCCCTTCCTTGGTAAACGAGTCGAAGAAAGCAATTTCTCAACTGTACCATTAAGGGATGAGTTCCTTGAAAATGCTAGGCTATTTATTTTCGAGACATACTGCAGAATACACCAACGCATTGACATGGGAGTACTTGCCGAGAAGCTAAATTTGAATTATGAGGAGGCTGAGAGATGGATTGTGAACCTCATACGAGGCTTAAAGCTTGATGCCAAAATTGACCTGCACAAACTGGAAAAAAAAAAACTGTTATCATGGAACCTAATCATCCAATGTGTATGA 597 0.4606 MDSCMTLLRLLRLRTSDPPGSPPLATSSVSNHPVPLFPCTPSEPLPSQRSHLAALPSTMPLAGANYSWRSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEEAERWIVNLIRGLKLDAKIDLHKLEKKKLLSWNLIIQCV* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5585 198 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 69 181 - -
Psa5g5585 198 SUPERFAMILY "Winged helix" DNA-binding domain 121 179 IPR036390 -
Psa5g5585 198 Pfam PCI domain 74 179 IPR000717 -
Psa5g5585 198 ProSiteProfiles PCI domain profile. 2 192 IPR000717 -
Psa5g5585 198 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 69 181 IPR016650 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5585 Psa-Chr5 487968315 487970853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5585 70 179 Eukaryotic Initiation Factors Gene Family AT3G57290 90.909 3.72e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5585 K03250 - qsu:111999690 223.016