Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5579 ATGAGACCTAAAGGGGTGAAGTGCTTCGGAAAGAGATCAGAACGCTATGGAAGTATTGACAACAGGCTCGCTCTTGTCATGAAGAGTGGAGAATATACCCTAAGTTACAAAATTGATCTCAAGTCCCTGAGGAATCCTAAATGGGAGTTGACTATCATTGCCAACAATTGCCTTCTTTTGAGGAAATCTGAAATCGAATAA 201 0.408 MRPKGVKCFGKRSERYGSIDNRLALVMKSGEYTLSYKIDLKSLRNPKWELTIIANNCLLLRKSEIE* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5579 66 Gene3D - 12 66 IPR029064 -
Psa5g5579 66 SUPERFAMILY L30e-like 18 65 IPR029064 -
Psa5g5579 66 PANTHER 60S RIBOSOMAL PROTEIN L30-LIKE 16 66 - -
Psa5g5579 66 PANTHER RIBOSOMAL PROTEIN L30 16 66 IPR039109 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5579 Psa-Chr5 487182919 487183119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5579 11 66 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 57.143 1.54e-14 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5579 K02908 - pvy:116132376 73.559