Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5577 ATGACTGCTGGAGGTGCGATGATTGTTCTGATTCAAAGGAAAACCACCATTCCAACAAAGAAAGAACAAGTTTTCTCAACCTATTCTGACAACCAGCCTGGTGTCTTGATCCCAGTCTTTGAAGGAGAGAGAACAAGGACTAGGGATAACAATTTGTTGGGCAAGTTTGAACTTTCTGGTATTCCTCCTGTTCTTTCTAAAGGTGGTCTGTAG 213 0.4225 MTAGGAMIVLIQRKTTIPTKKEQVFSTYSDNQPGVLIPVFEGERTRTRDNNLLGKFELSGIPPVLSKGGL* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5577 70 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 2 64 - -
Psa5g5577 70 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 64 IPR029047 -
Psa5g5577 70 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 68 IPR029047 -
Psa5g5577 70 PANTHER HEAT SHOCK PROTEIN 70KDA 2 64 IPR013126 GO:0005524|GO:0140662
Psa5g5577 70 Pfam Hsp70 protein 2 64 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5577 Psa-Chr5 487081782 487081994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5577 2 64 Calmodulin-binding Proteins AT3G09440 87.302 2.33e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5577 K03283 - dcr:108208858 118.242